Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trbv13-3A0A0B4J1H2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms