Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gm9013-201ENSMUST00000132939 882 ntBASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gm44450-201ENSMUST00000199528 114 ntBASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.6□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms