Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7n-4A0A075B620 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Gm43017-201ENSMUST00000198296 752 ntBASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Zfp783-201ENSMUST00000095946 670 ntBASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7n-4A0A075B620 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Gm12821-201ENSMUST00000120022 600 ntBASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7n-4A0A075B620 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Gm2399-201ENSMUST00000104944 225 ntBASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7n-4A0A075B620 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7n-4A0A075B620 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms