Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC040174.2-201ENST00000602701 465 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 OR4H6P-202ENST00000603819 340 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 AC010201.1-201ENST00000605051 540 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 AC100847.1-201ENST00000611316 481 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 AC025016.1-201ENST00000616746 682 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 AL138721.1-201ENST00000616756 179 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 AC068831.8-201ENST00000620171 435 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 AC067931.1-201ENST00000624190 671 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 AC116563.2-201ENST00000624751 535 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 AL049536.1-201ENST00000625043 744 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF6Q9Y252 AC010300.1-201ENST00000600671 5134 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF6Q9Y252 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.19□□□□□ -1.74
RNF6Q9Y252 MFSD8-220ENST00000641243 1422 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF6Q9Y252 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RNF6Q9Y252 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF6Q9Y252 AC009229.4-201ENST00000623854 1947 ntBASIC4.19□□□□□ -1.74
RNF6Q9Y252 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 AL445437.1-201ENST00000623157 3087 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC096656.1-201ENST00000623826 1364 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 RAD1P1-201ENST00000231383 813 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 OR10J6P-201ENST00000289731 930 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 SNORD74.4-201ENST00000364129 80 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 RNU6-146P-201ENST00000384602 108 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 MIR142-201ENST00000384835 87 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 ATP5F1P2-201ENST00000398143 760 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC013404.1-201ENST00000413068 249 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC023141.6-201ENST00000429418 337 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 HLA-N-201ENST00000437516 135 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 CABYRP1-201ENST00000465493 1045 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 SYT14P1-201ENST00000481459 721 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC025459.1-201ENST00000504072 156 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 RN7SKP141-201ENST00000516167 338 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AF186190.1-201ENST00000517470 480 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 IFITM8P-201ENST00000522529 394 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 KPNA2P3-201ENST00000584190 848 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC023762.1-201ENST00000603280 584 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC103792.1-201ENST00000603591 919 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AL133338.2-201ENST00000604292 736 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AL021368.1-201ENST00000607490 540 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 OR7A19P-201ENST00000608051 733 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC092653.1-201ENST00000608509 531 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF6Q9Y252 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
RNF6Q9Y252 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF6Q9Y252 DDX18P3-201ENST00000404856 2007 ntBASIC4.17□□□□□ -1.74
RNF6Q9Y252 AL391684.1-202ENST00000641293 1636 ntBASIC4.17□□□□□ -1.74
RNF6Q9Y252 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF6Q9Y252 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF6Q9Y252 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
RNF6Q9Y252 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RNF6Q9Y252 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF6Q9Y252 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF6Q9Y252 RNA5SP479-201ENST00000364858 117 ntBASIC4.17□□□□□ -1.74
RNF6Q9Y252 SNORA71.2-201ENST00000364941 134 ntBASIC4.17□□□□□ -1.74
RNF6Q9Y252 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
RNF6Q9Y252 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF6Q9Y252 RNU1-63P-201ENST00000383902 164 ntBASIC4.17□□□□□ -1.74
RNF6Q9Y252 RNU6-317P-201ENST00000384031 107 ntBASIC4.17□□□□□ -1.74
RNF6Q9Y252 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF6Q9Y252 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF6Q9Y252 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF6Q9Y252 CBX1P4-201ENST00000439415 457 ntBASIC4.17□□□□□ -1.74
RNF6Q9Y252 H2AFZP5-201ENST00000446960 382 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms