Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AL109618.2-201ENST00000605527 211 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC012213.4-201ENST00000606457 354 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC015802.5-201ENST00000607478 399 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 FAM27D1-201ENST00000612308 341 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC009032.1-201ENST00000617574 431 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AL445363.3-201ENST00000623080 671 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC119674.1-220ENST00000641502 1048 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 PHKBP1-201ENST00000450951 1951 ntBASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
APOBEC3BQ9UH17 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AC018529.3-201ENST00000624212 2254 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 RN7SKP235-201ENST00000410662 305 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AL512504.1-201ENST00000415494 778 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AL590806.1-201ENST00000415818 853 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 COX6B1P7-201ENST00000430845 235 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 NDUFS5P3-201ENST00000450668 321 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 EIF2S2P5-201ENST00000457635 968 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AC090013.1-201ENST00000485147 480 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AL352979.3-201ENST00000553515 247 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AL731537.2-201ENST00000561565 951 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 OR6R2P-201ENST00000609216 300 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 SNX18P1Y-201ENST00000616231 511 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AC079298.2-201ENST00000623885 459 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 CFTRP2-201ENST00000634304 199 ntBASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.22□□□□□ -1.73
APOBEC3BQ9UH17 AL133243.3-201ENST00000617415 3004 ntBASIC4.21□□□□□ -1.73
APOBEC3BQ9UH17 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.73
APOBEC3BQ9UH17 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.21□□□□□ -1.73
APOBEC3BQ9UH17 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 RNU6-146P-201ENST00000384602 108 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 LAP3P1-201ENST00000403648 294 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 SEC63P1-201ENST00000425785 1258 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 MTCO1P45-201ENST00000431457 267 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 RPEP2-201ENST00000432149 701 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 RPL31P20-201ENST00000449593 360 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 AC108022.1-201ENST00000493466 478 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 RNU6-319P-201ENST00000516025 108 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 OR7E10P-201ENST00000526420 991 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 DEFB109D-201ENST00000529497 240 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 OR8R1P-201ENST00000543943 764 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 AC123786.2-201ENST00000603459 275 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 AC015922.4-201ENST00000612568 690 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 AL353726.1-201ENST00000614041 1000 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 AL162233.1-201ENST00000620014 944 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 LINC00216-201ENST00000623548 1126 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 RNA5SP196-201ENST00000625967 102 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 PNPT1P2-201ENST00000456768 2050 ntBASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms