Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AC022655.2-201ENST00000577280 318 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AP000255.1-201ENST00000610276 676 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AC090246.1-201ENST00000616499 426 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AP003497.2-201ENST00000624220 967 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AL445437.1-201ENST00000623157 3087 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC095050.2-201ENST00000510748 1458 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AL138785.1-201ENST00000425821 331 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 RPL7P28-201ENST00000437739 740 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 VN1R25P-201ENST00000443385 738 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AL645939.1-201ENST00000453429 797 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 VN1R40P-201ENST00000455196 941 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 MTND6P6-201ENST00000478031 263 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 RPL35P6-201ENST00000490024 372 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC005912.1-201ENST00000495392 255 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 SEC11B-201ENST00000518383 499 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC105233.3-201ENST00000531125 744 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 GNRHR2P1-201ENST00000555315 631 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC068831.4-201ENST00000556118 109 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC110743.1-201ENST00000584870 478 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC093765.1-201ENST00000603758 881 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC114878.2-201ENST00000604863 1251 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC000123.2-201ENST00000623124 461 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AL137100.1-201ENST00000556703 1620 ntBASIC3.88□□□□□ -1.79
VAPAQ9P0L0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.88□□□□□ -1.79
VAPAQ9P0L0 AC009951.1-201ENST00000623674 2614 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AL035419.1-201ENST00000397037 564 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 ZNF603P-201ENST00000405613 487 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 RNA5SP239-201ENST00000410218 129 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC087650.1-201ENST00000431445 468 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 RPL23AP46-201ENST00000438548 490 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AL356535.1-201ENST00000440335 398 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC069499.1-201ENST00000489433 509 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 KCTD9P2-201ENST00000512203 1013 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AL137246.1-201ENST00000607072 977 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AP003392.5-201ENST00000607857 415 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 uc_338.32-201ENST00000615087 172 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AL589935.2-201ENST00000616471 1231 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AL590410.1-201ENST00000617925 333 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AL359715.5-201ENST00000623431 443 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 BDP1P-201ENST00000582658 1990 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AC017007.4-201ENST00000503353 1352 ntBASIC3.87□□□□□ -1.79
VAPAQ9P0L0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.87□□□□□ -1.79
VAPAQ9P0L0 AL592437.2-201ENST00000421655 2434 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms