Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 FTLP19-201ENST00000433300 394 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 MTCO3P5-201ENST00000433620 714 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 RPL23AP76-201ENST00000441860 458 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 CEACAMP9-201ENST00000442990 513 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 TPTE2P6-202ENST00000445572 1007 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 RN7SL860P-201ENST00000473738 223 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC008837.2-201ENST00000513076 418 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 RNA5SP43-201ENST00000516559 110 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 RN7SKP283-201ENST00000517197 270 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC087373.1-201ENST00000524920 491 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 BGLT3-201ENST00000564523 994 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 OR4K7P-201ENST00000580232 945 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 MIR4737-201ENST00000583979 81 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC090616.2-202ENST00000584248 222 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 MIR7853-201ENST00000584820 132 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC105254.2-201ENST00000603636 436 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC087283.1-201ENST00000604029 1074 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AL031320.1-201ENST00000604177 357 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC011626.1-201ENST00000604710 562 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC096553.1-201ENST00000605169 829 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AP005432.2-201ENST00000608162 586 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AL354976.1-201ENST00000613843 387 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC234782.5-201ENST00000617723 324 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AP000676.3-201ENST00000623299 569 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTA1Q9NP79 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTA1Q9NP79 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTA1Q9NP79 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTA1Q9NP79 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VTA1Q9NP79 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 RNA5SP453-201ENST00000362503 119 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 RNU6-839P-201ENST00000363347 108 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 SNORD116-9-201ENST00000384000 95 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 SNORD116-3-201ENST00000384287 95 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 SNORD116-7-201ENST00000384404 95 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 SNORD116-5-201ENST00000384462 95 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 MIR1302-8-201ENST00000408342 128 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 AL133482.1-201ENST00000415988 498 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC098592.1-201ENST00000419352 333 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 SEPT2P1-201ENST00000419651 180 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 ATP5F1P1-201ENST00000433775 569 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 SEPT7P5-201ENST00000434048 306 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 MTND4P32-201ENST00000437189 1237 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 AL354714.3-201ENST00000447284 493 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 IGLV2-34-201ENST00000490007 283 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC097173.1-201ENST00000505862 819 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC021755.1-201ENST00000559747 1447 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 SULT1C2P2-201ENST00000562517 294 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC022069.1-201ENST00000582910 658 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC006363.1-201ENST00000603806 463 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC105129.3-201ENST00000605455 485 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms