Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 UQCRHP4-201ENST00000471686 272 ntBASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 KCTD9P2-201ENST00000512203 1013 ntBASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 RNA5SP143-201ENST00000516936 115 ntBASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 AC079171.1-201ENST00000568788 914 ntBASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 RPL23AP87-202ENST00000573039 466 ntBASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 AC068020.1-201ENST00000594215 661 ntBASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 MIR492-201ENST00000638676 116 ntBASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
UPF3BQ9BZI7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.9□□□□□ -1.62
UPF3BQ9BZI7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.9□□□□□ -1.62
UPF3BQ9BZI7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
UPF3BQ9BZI7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.9□□□□□ -1.62
UPF3BQ9BZI7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
UPF3BQ9BZI7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.9□□□□□ -1.62
UPF3BQ9BZI7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 PTMAP2-201ENST00000397627 327 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AL022722.2-201ENST00000402519 180 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC004552.1-201ENST00000419089 348 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 OR4C10P-201ENST00000434991 931 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC006011.1-201ENST00000442758 349 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 RPL7L1P8-201ENST00000469911 741 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 RPS26P3-201ENST00000470205 348 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC090543.2-201ENST00000483963 348 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC004057.1-201ENST00000485827 348 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 IGKV2-38-201ENST00000517443 247 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AP003730.1-201ENST00000524605 285 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC107918.3-201ENST00000533272 382 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC122134.1-201ENST00000565664 1104 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC114878.2-201ENST00000604863 1251 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 AC090246.1-201ENST00000616499 426 ntBASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
UPF3BQ9BZI7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 ERCC6-202ENST00000374127 1782 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 RN7SKP182-201ENST00000410772 298 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 RNA5SP39-201ENST00000411245 120 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 AC008280.1-201ENST00000418851 412 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 MTCO1P54-201ENST00000430139 712 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 COX6B1P7-201ENST00000430845 235 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 RNU7-143P-201ENST00000516781 65 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 AC008739.3-201ENST00000603262 127 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 AL158062.1-201ENST00000619632 745 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 AL773545.4-201ENST00000637262 310 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 AL513478.4-201ENST00000641636 310 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 MTND4P26-201ENST00000415971 1359 ntBASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UPF3BQ9BZI7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AL450326.2-201ENST00000421913 1962 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 RNA5SP387-201ENST00000364226 106 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AC019155.1-201ENST00000382242 574 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 RNU1-13P-201ENST00000384499 162 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 MIR708-201ENST00000390708 88 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 PPIAP31-201ENST00000405422 495 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 RPL23AP26-201ENST00000412728 464 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 RPL23AP46-201ENST00000438548 490 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AC139783.2-201ENST00000504847 1145 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AC108475.1-201ENST00000507880 950 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 HNRNPKP5-201ENST00000515300 253 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms