Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 SNORA70.4-201ENST00000365509 134 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 MIR670-201ENST00000390142 98 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 ELOCP8-201ENST00000439309 332 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 ELOCP15-201ENST00000442090 332 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 VN1R34P-201ENST00000447387 883 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 RN7SL132P-201ENST00000478131 296 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 AC023632.4-201ENST00000517783 191 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 QTRT1P1-201ENST00000604344 1078 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 SNORA35B-201ENST00000607417 129 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 AC015922.4-201ENST00000612568 690 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 AC092162.3-201ENST00000624511 1624 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 SNORA62.3-201ENST00000365110 153 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 RNA5SP306-201ENST00000411087 107 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 AL358232.1-201ENST00000448030 501 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 RAD23BP3-201ENST00000454157 1152 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 RPS29P19-201ENST00000479709 171 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 AC006517.1-201ENST00000480485 328 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 AL133372.1-201ENST00000493565 745 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 AC139783.2-201ENST00000504847 1145 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 RNU4-18P-201ENST00000516751 149 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 RNU1-45P-201ENST00000517191 141 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 AC007599.1-201ENST00000568688 1174 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 MIR6075-201ENST00000620782 95 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 MIR7702-201ENST00000621931 59 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 AC112200.1-201ENST00000625015 234 ntBASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPAP1Q9BWH6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 Z82217.1-201ENST00000625157 8149 ntBASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 OR8F1P-201ENST00000425243 930 ntBASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AC069285.2-201ENST00000440210 275 ntBASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 SNRPFP2-201ENST00000440710 251 ntBASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AC113398.2-201ENST00000507630 558 ntBASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 NPM1P41-201ENST00000512920 831 ntBASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 UBTFL9-201ENST00000534504 1148 ntBASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AC012603.1-201ENST00000606424 528 ntBASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 AP001005.3-201ENST00000622049 129 ntBASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 MAPK10-372ENST00000641954 3413 ntBASIC5.01□□□□□ -1.61
RPAP1Q9BWH6 MTND5P23-201ENST00000430812 1655 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RPAP1Q9BWH6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RPAP1Q9BWH6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPAP1Q9BWH6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPAP1Q9BWH6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPAP1Q9BWH6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5□□□□□ -1.61
RPAP1Q9BWH6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
RPAP1Q9BWH6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RPAP1Q9BWH6 RPL17P50-201ENST00000396131 546 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 RN7SKP159-201ENST00000410657 292 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 AC234781.4-201ENST00000419384 244 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 HMGB3P5-201ENST00000428894 612 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 ELOCP18-201ENST00000434209 337 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms