Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP47Q96K76 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
USP47Q96K76 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
USP47Q96K76 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP47Q96K76 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.52□□□□□ -1.53
USP47Q96K76 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP47Q96K76 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USP47Q96K76 MIR93-201ENST00000385024 80 ntBASIC5.52□□□□□ -1.53
USP47Q96K76 MIR199A2-201ENST00000385289 110 ntBASIC5.52□□□□□ -1.53
USP47Q96K76 RPL7AP73-201ENST00000413490 353 ntBASIC5.52□□□□□ -1.53
USP47Q96K76 AL050321.1-201ENST00000432363 400 ntBASIC5.52□□□□□ -1.53
USP47Q96K76 AC013410.1-201ENST00000436223 1232 ntBASIC5.52□□□□□ -1.53
USP47Q96K76 AC069285.2-201ENST00000440210 275 ntBASIC5.52□□□□□ -1.53
USP47Q96K76 RANP8-201ENST00000444720 713 ntBASIC5.52□□□□□ -1.53
USP47Q96K76 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.52□□□□□ -1.53
USP47Q96K76 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
USP47Q96K76 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.52□□□□□ -1.53
USP47Q96K76 SCARNA14-201ENST00000516903 136 ntBASIC5.52□□□□□ -1.53
USP47Q96K76 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.52□□□□□ -1.53
USP47Q96K76 AL606490.9-201ENST00000603331 271 ntBASIC5.52□□□□□ -1.53
USP47Q96K76 AC112230.1-201ENST00000604342 547 ntBASIC5.52□□□□□ -1.53
USP47Q96K76 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.52□□□□□ -1.53
USP47Q96K76 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP47Q96K76 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.52□□□□□ -1.53
USP47Q96K76 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.52□□□□□ -1.53
USP47Q96K76 AC016588.2-201ENST00000632484 3021 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP47Q96K76 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP47Q96K76 AL161912.2-201ENST00000565707 3007 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP47Q96K76 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP47Q96K76 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP47Q96K76 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP47Q96K76 YME1L1P1-201ENST00000429435 297 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 AL500522.2-201ENST00000448562 343 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 AC090589.1-201ENST00000473109 362 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP47Q96K76 PPIAP15-201ENST00000479662 484 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.51□□□□□ -1.53
USP47Q96K76 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.51□□□□□ -1.53
USP47Q96K76 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.51□□□□□ -1.53
USP47Q96K76 AC011270.1-201ENST00000558606 583 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.51□□□□□ -1.53
USP47Q96K76 AC015726.1-201ENST00000602353 681 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 AC008638.3-201ENST00000603341 463 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 AC069200.1-201ENST00000609511 323 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 AC128687.2-201ENST00000609657 566 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 FP236240.3-201ENST00000623061 327 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 AF001550.2-201ENST00000636643 217 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 AC006042.3-201ENST00000454684 1469 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 AC021242.1-201ENST00000507315 2035 ntBASIC5.51□□□□□ -1.53
USP47Q96K76 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
USP47Q96K76 AL132656.3-201ENST00000606384 1595 ntBASIC5.5□□□□□ -1.53
USP47Q96K76 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP47Q96K76 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP47Q96K76 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP47Q96K76 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP47Q96K76 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP47Q96K76 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.5□□□□□ -1.53
USP47Q96K76 U1.1-201ENST00000384101 164 ntBASIC5.5□□□□□ -1.53
USP47Q96K76 RNU6-233P-201ENST00000410845 141 ntBASIC5.5□□□□□ -1.53
USP47Q96K76 SEPT14P1-201ENST00000458703 648 ntBASIC5.5□□□□□ -1.53
USP47Q96K76 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP47Q96K76 AC007688.1-201ENST00000475592 759 ntBASIC5.5□□□□□ -1.53
USP47Q96K76 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.5□□□□□ -1.53
USP47Q96K76 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.5□□□□□ -1.53
USP47Q96K76 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.5□□□□□ -1.53
USP47Q96K76 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.5□□□□□ -1.53
USP47Q96K76 NPM1P47-201ENST00000560843 856 ntBASIC5.5□□□□□ -1.53
USP47Q96K76 AC107982.3-201ENST00000584957 985 ntBASIC5.5□□□□□ -1.53
USP47Q96K76 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.5□□□□□ -1.53
USP47Q96K76 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.5□□□□□ -1.53
USP47Q96K76 AL645927.2-201ENST00000618350 349 ntBASIC5.5□□□□□ -1.53
USP47Q96K76 AP002001.2-201ENST00000529025 1469 ntBASIC5.5□□□□□ -1.53
USP47Q96K76 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP47Q96K76 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
USP47Q96K76 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP47Q96K76 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
USP47Q96K76 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP47Q96K76 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.49□□□□□ -1.53
USP47Q96K76 SNORD74.4-201ENST00000364129 80 ntBASIC5.49□□□□□ -1.53
USP47Q96K76 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.49□□□□□ -1.53
USP47Q96K76 GNG5P5-201ENST00000420444 220 ntBASIC5.49□□□□□ -1.53
USP47Q96K76 OR2X1P-201ENST00000421144 687 ntBASIC5.49□□□□□ -1.53
USP47Q96K76 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.49□□□□□ -1.53
USP47Q96K76 PRSS3P4-201ENST00000453323 162 ntBASIC5.49□□□□□ -1.53
USP47Q96K76 RPS3AP6-201ENST00000484430 795 ntBASIC5.49□□□□□ -1.53
USP47Q96K76 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP47Q96K76 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.49□□□□□ -1.53
USP47Q96K76 AC084759.1-201ENST00000561168 290 ntBASIC5.49□□□□□ -1.53
USP47Q96K76 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.49□□□□□ -1.53
USP47Q96K76 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
USP47Q96K76 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.49□□□□□ -1.53
USP47Q96K76 AL353684.1-201ENST00000622677 1120 ntBASIC5.49□□□□□ -1.53
USP47Q96K76 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.49□□□□□ -1.53
USP47Q96K76 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.49□□□□□ -1.53
USP47Q96K76 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.49□□□□□ -1.53
USP47Q96K76 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP47Q96K76 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms