Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MTCYBP7-201ENST00000419540 1134 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 OR6K4P-201ENST00000423179 955 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 RPL23AP46-201ENST00000438548 490 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 CACYBPP1-201ENST00000438592 684 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 NUTF2P7-201ENST00000453086 375 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC103987.1-201ENST00000473394 348 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 IGBP1P5-201ENST00000507524 1000 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 STMN1P2-201ENST00000508435 439 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC022655.2-201ENST00000577280 318 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC020910.2-201ENST00000603635 610 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AL591034.3-201ENST00000605511 685 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 MIR6798-201ENST00000612887 67 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AL590410.1-201ENST00000617925 333 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC138907.10-201ENST00000623708 983 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC009229.4-201ENST00000623854 1947 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AC092162.3-201ENST00000624511 1624 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 CASC19-284ENST00000642142 1868 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC017104.4-201ENST00000636283 1592 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC136624.1-201ENST00000400791 413 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AL022722.2-201ENST00000402519 180 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 RNA5SP317-201ENST00000410176 116 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 RNA5SP311-201ENST00000411290 116 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC004975.1-201ENST00000428733 208 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 MRPL50P1-201ENST00000431951 384 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC092013.1-201ENST00000438795 332 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 MORF4L1P4-201ENST00000450245 976 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 FCF1P7-201ENST00000451185 558 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 IFNWP4-201ENST00000453148 294 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 SEPT14P1-201ENST00000458703 648 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 METTL15P1-201ENST00000481421 1045 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AF213884.1-201ENST00000488102 463 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 RNA5SP315-201ENST00000516340 116 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 RNA5SP312-201ENST00000517068 116 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 IGLV3-26-201ENST00000520756 302 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC087888.1-201ENST00000550884 1254 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC064801.1-201ENST00000612025 407 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 MIR7154-201ENST00000620673 73 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC016717.3-201ENST00000624730 554 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC010608.2-201ENST00000624830 470 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC055839.1-201ENST00000634467 498 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 PHKBP1-201ENST00000450951 1951 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 AC026951.1-201ENST00000559530 2459 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 CYP1D1P-201ENST00000416662 1433 ntBASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
ECHDC3Q96DC8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 RNU6-1251P-201ENST00000364502 107 ntBASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 AL356095.1-201ENST00000417217 199 ntBASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 SEC63P1-201ENST00000425785 1258 ntBASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 AL356276.2-201ENST00000435919 558 ntBASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 AC093716.1-201ENST00000435923 377 ntBASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 RAD23BP3-201ENST00000454157 1152 ntBASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 RN7SL604P-201ENST00000492589 296 ntBASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 AC093824.1-201ENST00000508796 343 ntBASIC4.18□□□□□ -1.74
ECHDC3Q96DC8 AC117525.1-201ENST00000515228 503 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms