Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 AL352979.3-201ENST00000553515 247 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 SLC25A36P1-201ENST00000590111 465 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 AC012213.4-201ENST00000606457 354 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 AL162574.2-201ENST00000614618 657 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 AC067852.7-201ENST00000623270 535 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 USP9YP4-201ENST00000424401 1745 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTR9Q6PD62 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AL121657.1-201ENST00000327215 531 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 RNU1-14P-201ENST00000362759 152 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC093719.1-202ENST00000392735 373 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 MIR1911-201ENST00000410783 80 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AL391219.1-201ENST00000422570 483 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 CR848007.2-201ENST00000424918 787 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC004975.1-201ENST00000428733 208 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 RPS20P1-201ENST00000434853 354 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 GSTA7P-201ENST00000438425 448 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTR9Q6PD62 RPS27AP15-201ENST00000447672 466 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 RNU6-319P-201ENST00000516025 108 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 RNU6-760P-201ENST00000516078 97 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 SNORA31.9-201ENST00000516429 84 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 MRPL49P2-201ENST00000521066 465 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AL161729.3-201ENST00000603533 673 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC020910.2-201ENST00000603635 610 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 AL592494.3-201ENST00000609485 464 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC008013.2-202ENST00000637965 364 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 AL163152.1-201ENST00000642001 374 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 LARP1BP1-201ENST00000506036 1359 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CTR9Q6PD62 AC026951.1-201ENST00000559530 2459 ntBASIC5.11□□□□□ -1.59
CTR9Q6PD62 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTR9Q6PD62 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 MIR383-201ENST00000362257 73 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 SNORD66.1-201ENST00000391230 76 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 AL589655.1-201ENST00000405398 482 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTR9Q6PD62 GSTM3P2-201ENST00000412746 530 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 RPS26P47-201ENST00000427219 348 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 AL132765.1-201ENST00000434165 553 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 AL353597.2-202ENST00000434901 373 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTR9Q6PD62 RPL7P28-201ENST00000437739 740 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 MTCO3P43-201ENST00000440974 771 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 RPS15AP29-201ENST00000445539 400 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 RPL23AP65-201ENST00000475608 468 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTR9Q6PD62 RNU6-491P-201ENST00000516099 110 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 RNA5SP73-201ENST00000516744 108 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.1□□□□□ -1.59
CTR9Q6PD62 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTR9Q6PD62 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.1□□□□□ -1.59
CTR9Q6PD62 AC005261.4-201ENST00000600047 1385 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms