Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFC3P40938 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RFC3P40938 AL031985.3-201ENST00000565390 2449 ntBASIC3.98□□□□□ -1.77
RFC3P40938 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFC3P40938 Y_RNA.126-201ENST00000363382 111 ntBASIC3.98□□□□□ -1.77
RFC3P40938 RNA5SP515-201ENST00000364570 118 ntBASIC3.98□□□□□ -1.77
RFC3P40938 RNA5SP366-201ENST00000365454 123 ntBASIC3.98□□□□□ -1.77
RFC3P40938 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.98□□□□□ -1.77
RFC3P40938 MIR3065-201ENST00000390137 79 ntBASIC3.98□□□□□ -1.77
RFC3P40938 AC097374.1-203ENST00000400783 485 ntBASIC3.98□□□□□ -1.77
RFC3P40938 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.98□□□□□ -1.77
RFC3P40938 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.98□□□□□ -1.77
RFC3P40938 RPS20P1-201ENST00000434853 354 ntBASIC3.98□□□□□ -1.77
RFC3P40938 ARL5AP3-201ENST00000439327 386 ntBASIC3.98□□□□□ -1.77
RFC3P40938 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.98□□□□□ -1.77
RFC3P40938 PSMC1P13-201ENST00000458195 985 ntBASIC3.98□□□□□ -1.77
RFC3P40938 EIF2S2P4-201ENST00000461070 984 ntBASIC3.98□□□□□ -1.77
RFC3P40938 RPL35AP15-201ENST00000468042 339 ntBASIC3.98□□□□□ -1.77
RFC3P40938 RPL7P19-201ENST00000469948 618 ntBASIC3.98□□□□□ -1.77
RFC3P40938 AC146944.2-203ENST00000502493 354 ntBASIC3.98□□□□□ -1.77
RFC3P40938 AC010627.1-201ENST00000503819 1294 ntBASIC3.98□□□□□ -1.77
RFC3P40938 AC139495.1-202ENST00000513164 354 ntBASIC3.98□□□□□ -1.77
RFC3P40938 RNU6-347P-201ENST00000516658 105 ntBASIC3.98□□□□□ -1.77
RFC3P40938 VTA1P2-201ENST00000520205 911 ntBASIC3.98□□□□□ -1.77
RFC3P40938 AC008676.3-201ENST00000521237 435 ntBASIC3.98□□□□□ -1.77
RFC3P40938 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFC3P40938 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.98□□□□□ -1.77
RFC3P40938 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.98□□□□□ -1.77
RFC3P40938 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.98□□□□□ -1.77
RFC3P40938 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFC3P40938 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.98□□□□□ -1.77
RFC3P40938 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.98□□□□□ -1.77
RFC3P40938 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.98□□□□□ -1.77
RFC3P40938 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.98□□□□□ -1.77
RFC3P40938 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.98□□□□□ -1.77
RFC3P40938 AC068020.1-201ENST00000594215 661 ntBASIC3.98□□□□□ -1.77
RFC3P40938 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.98□□□□□ -1.77
RFC3P40938 AC079587.1-201ENST00000603846 277 ntBASIC3.98□□□□□ -1.77
RFC3P40938 ZYXP1-201ENST00000617638 118 ntBASIC3.98□□□□□ -1.77
RFC3P40938 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.98□□□□□ -1.77
RFC3P40938 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RFC3P40938 AC091905.2-201ENST00000623143 306 ntBASIC3.98□□□□□ -1.77
RFC3P40938 MIR3653-201ENST00000625572 110 ntBASIC3.98□□□□□ -1.77
RFC3P40938 AC140479.6-201ENST00000633535 357 ntBASIC3.98□□□□□ -1.77
RFC3P40938 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.98□□□□□ -1.77
RFC3P40938 AP001002.1-201ENST00000625148 1513 ntBASIC3.98□□□□□ -1.77
RFC3P40938 MFSD8-242ENST00000641690 4199 ntBASIC3.98□□□□□ -1.77
RFC3P40938 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFC3P40938 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFC3P40938 AC006971.1-201ENST00000407916 4486 ntBASIC3.98□□□□□ -1.77
RFC3P40938 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RFC3P40938 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.98□□□□□ -1.77
RFC3P40938 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RFC3P40938 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 MAPK10-304ENST00000641341 3984 ntBASIC3.97□□□□□ -1.77
RFC3P40938 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RFC3P40938 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.97□□□□□ -1.77
RFC3P40938 RNU6-304P-201ENST00000364855 107 ntBASIC3.97□□□□□ -1.77
RFC3P40938 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.97□□□□□ -1.77
RFC3P40938 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.97□□□□□ -1.77
RFC3P40938 RPL21P91-201ENST00000429231 479 ntBASIC3.97□□□□□ -1.77
RFC3P40938 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.97□□□□□ -1.77
RFC3P40938 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.97□□□□□ -1.77
RFC3P40938 AC104629.2-201ENST00000468627 598 ntBASIC3.97□□□□□ -1.77
RFC3P40938 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
RFC3P40938 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.97□□□□□ -1.77
RFC3P40938 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.97□□□□□ -1.77
RFC3P40938 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.97□□□□□ -1.77
RFC3P40938 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.97□□□□□ -1.77
RFC3P40938 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.97□□□□□ -1.77
RFC3P40938 AC007224.1-201ENST00000564410 144 ntBASIC3.97□□□□□ -1.77
RFC3P40938 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 AC023509.5-201ENST00000617434 807 ntBASIC3.97□□□□□ -1.77
RFC3P40938 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFC3P40938 AC016588.2-201ENST00000632484 3021 ntBASIC3.97□□□□□ -1.77
RFC3P40938 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.97□□□□□ -1.77
RFC3P40938 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
RFC3P40938 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RFC3P40938 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RFC3P40938 AC009229.4-201ENST00000623854 1947 ntBASIC3.96□□□□□ -1.78
RFC3P40938 RNU6-618P-201ENST00000363518 112 ntBASIC3.96□□□□□ -1.78
RFC3P40938 RNA5SP151-201ENST00000365632 117 ntBASIC3.96□□□□□ -1.78
RFC3P40938 RPS26P8-201ENST00000393490 348 ntBASIC3.96□□□□□ -1.78
RFC3P40938 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.96□□□□□ -1.78
RFC3P40938 RNA5SP36-201ENST00000410197 133 ntBASIC3.96□□□□□ -1.78
RFC3P40938 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.96□□□□□ -1.78
RFC3P40938 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFC3P40938 RPL23AP25-201ENST00000430973 463 ntBASIC3.96□□□□□ -1.78
RFC3P40938 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms