Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RNA5SP103-201ENST00000459503 118 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AP000893.1-201ENST00000474462 794 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 RN7SL481P-201ENST00000477764 299 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.86□□□□□ -1.63
CAPN3P20807 RN7SL441P-201ENST00000492388 296 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 SUMO2P5-201ENST00000506790 245 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.86□□□□□ -1.63
CAPN3P20807 AC012400.1-201ENST00000518452 381 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 BRD9P1-201ENST00000529855 560 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.86□□□□□ -1.63
CAPN3P20807 AC126177.5-201ENST00000549599 178 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.86□□□□□ -1.63
CAPN3P20807 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.86□□□□□ -1.63
CAPN3P20807 NDUFB4P11-201ENST00000560510 395 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.86□□□□□ -1.63
CAPN3P20807 MTCYBP28-201ENST00000566728 1132 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.86□□□□□ -1.63
CAPN3P20807 MIR4330-201ENST00000579077 105 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AC233702.9-201ENST00000581528 203 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.86□□□□□ -1.63
CAPN3P20807 AP001180.3-201ENST00000582221 145 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AL139022.2-201ENST00000606934 443 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AC022106.2-201ENST00000620114 757 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.86□□□□□ -1.63
CAPN3P20807 AL353662.3-201ENST00000625131 237 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.86□□□□□ -1.63
CAPN3P20807 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.86□□□□□ -1.63
CAPN3P20807 AC083843.3-201ENST00000623679 2186 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CAPN3P20807 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN3P20807 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN3P20807 AL022322.2-201ENST00000624072 20397 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.86□□□□□ -1.63
CAPN3P20807 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN3P20807 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN3P20807 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN3P20807 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN3P20807 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.86□□□□□ -1.63
CAPN3P20807 SAGE4P-201ENST00000442271 3381 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CAPN3P20807 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.85□□□□□ -1.63
CAPN3P20807 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN3P20807 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
CAPN3P20807 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CAPN3P20807 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN3P20807 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN3P20807 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CAPN3P20807 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CAPN3P20807 OR1L1-202ENST00000373686 1083 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN3P20807 RNU1-149P-201ENST00000390870 161 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 RNU6-1176P-201ENST00000390955 107 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 GSTA8P-201ENST00000404253 637 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.85□□□□□ -1.63
CAPN3P20807 RNU2-21P-201ENST00000410368 188 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AC069218.2-201ENST00000411665 344 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.85□□□□□ -1.63
CAPN3P20807 AC108075.1-201ENST00000424692 529 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AC010881.1-201ENST00000433830 235 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN3P20807 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.85□□□□□ -1.63
CAPN3P20807 PPIAP3-201ENST00000450588 505 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.85□□□□□ -1.63
CAPN3P20807 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.85□□□□□ -1.63
CAPN3P20807 AC093166.2-201ENST00000455969 1017 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 FCF1P6-201ENST00000456841 595 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AL591473.1-201ENST00000464297 313 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN3P20807 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN3P20807 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN3P20807 MTATP6P9-201ENST00000515039 680 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN3P20807 snoZ278.1-201ENST00000517059 112 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 RNU6-1028P-201ENST00000517164 93 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN3P20807 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.85□□□□□ -1.63
CAPN3P20807 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN3P20807 DEFB109D-201ENST00000529497 240 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN3P20807 AL390816.3-201ENST00000604527 1066 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.85□□□□□ -1.63
CAPN3P20807 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.85□□□□□ -1.63
CAPN3P20807 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN3P20807 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AP002505.2-201ENST00000623585 696 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AC124312.6-202ENST00000623624 418 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 AP003485.1-201ENST00000625093 753 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 CYP4F35P-202ENST00000636121 390 ntBASIC4.85□□□□□ -1.63
CAPN3P20807 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN3P20807 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN3P20807 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.85□□□□□ -1.63
CAPN3P20807 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN3P20807 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN3P20807 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN3P20807 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CAPN3P20807 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.84□□□□□ -1.63
CAPN3P20807 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.84□□□□□ -1.63
CAPN3P20807 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.84□□□□□ -1.63
CAPN3P20807 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN3P20807 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms