Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.98□□□□□ -1.77
P04436 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
P04436 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.98□□□□□ -1.77
P04436 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.98□□□□□ -1.77
P04436 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
P04436 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.98□□□□□ -1.77
P04436 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.97□□□□□ -1.77
P04436 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P04436 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P04436 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.97□□□□□ -1.77
P04436 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
P04436 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
P04436 MIR383-201ENST00000362257 73 ntBASIC3.97□□□□□ -1.77
P04436 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.97□□□□□ -1.77
P04436 AL078604.1-201ENST00000404609 466 ntBASIC3.97□□□□□ -1.77
P04436 RPL31P52-201ENST00000407532 367 ntBASIC3.97□□□□□ -1.77
P04436 SNORA74C-2-201ENST00000411179 201 ntBASIC3.97□□□□□ -1.77
P04436 RPL21P108-201ENST00000413857 481 ntBASIC3.97□□□□□ -1.77
P04436 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.97□□□□□ -1.77
P04436 MTND4P11-201ENST00000417020 1058 ntBASIC3.97□□□□□ -1.77
P04436 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.97□□□□□ -1.77
P04436 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.97□□□□□ -1.77
P04436 AL590623.1-201ENST00000427864 105 ntBASIC3.97□□□□□ -1.77
P04436 CDY14P-201ENST00000431260 1014 ntBASIC3.97□□□□□ -1.77
P04436 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.97□□□□□ -1.77
P04436 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.97□□□□□ -1.77
P04436 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.97□□□□□ -1.77
P04436 CDY12P-201ENST00000440679 1015 ntBASIC3.97□□□□□ -1.77
P04436 CDY13P-201ENST00000445813 1015 ntBASIC3.97□□□□□ -1.77
P04436 CDY23P-201ENST00000451661 1014 ntBASIC3.97□□□□□ -1.77
P04436 HMGB3P21-201ENST00000452483 547 ntBASIC3.97□□□□□ -1.77
P04436 TPRKBP1-201ENST00000456243 481 ntBASIC3.97□□□□□ -1.77
P04436 AC012158.1-204ENST00000483430 465 ntBASIC3.97□□□□□ -1.77
P04436 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
P04436 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.97□□□□□ -1.77
P04436 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.97□□□□□ -1.77
P04436 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.97□□□□□ -1.77
P04436 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.97□□□□□ -1.77
P04436 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.97□□□□□ -1.77
P04436 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P04436 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.97□□□□□ -1.77
P04436 TOMM20P2-201ENST00000540082 421 ntBASIC3.97□□□□□ -1.77
P04436 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.97□□□□□ -1.77
P04436 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.97□□□□□ -1.77
P04436 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P04436 HNRNPCP4-201ENST00000571636 900 ntBASIC3.97□□□□□ -1.77
P04436 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.97□□□□□ -1.77
P04436 RPL7P50-201ENST00000600588 727 ntBASIC3.97□□□□□ -1.77
P04436 MTCO3P22-201ENST00000603219 784 ntBASIC3.97□□□□□ -1.77
P04436 AL008729.2-201ENST00000606393 473 ntBASIC3.97□□□□□ -1.77
P04436 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.97□□□□□ -1.77
P04436 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
P04436 AC079298.2-201ENST00000623885 459 ntBASIC3.97□□□□□ -1.77
P04436 MIR3653-201ENST00000625572 110 ntBASIC3.97□□□□□ -1.77
P04436 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.97□□□□□ -1.77
P04436 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.97□□□□□ -1.77
P04436 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
P04436 AC083843.3-201ENST00000623679 2186 ntBASIC3.97□□□□□ -1.77
P04436 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
P04436 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
P04436 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
P04436 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
P04436 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
P04436 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
P04436 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
P04436 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
P04436 AC087190.4-201ENST00000574616 8334 ntBASIC3.96□□□□□ -1.78
P04436 EOGT-210ENST00000615922 1931 ntBASIC3.96□□□□□ -1.78
P04436 RNU1-132P-201ENST00000364300 164 ntBASIC3.96□□□□□ -1.78
P04436 SNORA27.3-201ENST00000364937 134 ntBASIC3.96□□□□□ -1.78
P04436 RNA5SP151-201ENST00000365632 117 ntBASIC3.96□□□□□ -1.78
P04436 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.96□□□□□ -1.78
P04436 AL589655.1-201ENST00000405398 482 ntBASIC3.96□□□□□ -1.78
P04436 AC105402.1-201ENST00000413336 545 ntBASIC3.96□□□□□ -1.78
P04436 CEACAMP8-201ENST00000413902 580 ntBASIC3.96□□□□□ -1.78
P04436 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
P04436 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.96□□□□□ -1.78
P04436 AL139095.3-201ENST00000419672 1203 ntBASIC3.96□□□□□ -1.78
P04436 RSL24D1P6-201ENST00000426934 401 ntBASIC3.96□□□□□ -1.78
P04436 RPS24P8-201ENST00000431490 402 ntBASIC3.96□□□□□ -1.78
P04436 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.96□□□□□ -1.78
P04436 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.96□□□□□ -1.78
P04436 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.96□□□□□ -1.78
P04436 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.96□□□□□ -1.78
P04436 AC091167.1-201ENST00000492017 396 ntBASIC3.96□□□□□ -1.78
P04436 AC108475.1-201ENST00000507880 950 ntBASIC3.96□□□□□ -1.78
P04436 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.96□□□□□ -1.78
P04436 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.96□□□□□ -1.78
P04436 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.96□□□□□ -1.78
P04436 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.96□□□□□ -1.78
P04436 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.96□□□□□ -1.78
P04436 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.96□□□□□ -1.78
P04436 ATP5J2P6-201ENST00000565203 266 ntBASIC3.96□□□□□ -1.78
P04436 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
P04436 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.96□□□□□ -1.78
P04436 AC021483.2-201ENST00000567415 758 ntBASIC3.96□□□□□ -1.78
P04436 MIR4512-201ENST00000583257 77 ntBASIC3.96□□□□□ -1.78
P04436 AC017076.1-201ENST00000607613 578 ntBASIC3.96□□□□□ -1.78
P04436 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.96□□□□□ -1.78
P04436 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms