Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.77□□□□□ -1.65
COL2A1P02458 PAICSP4-201ENST00000517543 1253 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
COL2A1P02458 MTND1P6-201ENST00000523621 946 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.77□□□□□ -1.65
COL2A1P02458 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.77□□□□□ -1.65
COL2A1P02458 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
COL2A1P02458 AC107982.3-201ENST00000584957 985 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 AC100814.1-201ENST00000606963 623 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 AC017076.1-201ENST00000607613 578 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 AC253576.2-201ENST00000618815 580 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.77□□□□□ -1.65
COL2A1P02458 AC009093.8-201ENST00000641769 292 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 AC097634.1-201ENST00000604491 2467 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL2A1P02458 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL2A1P02458 AL672167.1-205ENST00000641112 3080 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.77□□□□□ -1.65
COL2A1P02458 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL2A1P02458 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL2A1P02458 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL2A1P02458 VN1R8P-201ENST00000407739 893 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 BOLA3P4-201ENST00000418151 400 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.76□□□□□ -1.65
COL2A1P02458 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.76□□□□□ -1.65
COL2A1P02458 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.76□□□□□ -1.65
COL2A1P02458 MTCYBP32-201ENST00000427945 1084 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 HSFY7P-201ENST00000432672 318 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.76□□□□□ -1.65
COL2A1P02458 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.76□□□□□ -1.65
COL2A1P02458 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.76□□□□□ -1.65
COL2A1P02458 HSFY8P-201ENST00000437934 318 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.76□□□□□ -1.65
COL2A1P02458 HSFY5P-201ENST00000453726 309 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 AC006499.5-201ENST00000505037 514 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 GMPSP1-201ENST00000514075 579 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 NDUFA5P2-201ENST00000519723 344 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 AC087369.1-201ENST00000520775 996 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.76□□□□□ -1.65
COL2A1P02458 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.76□□□□□ -1.65
COL2A1P02458 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.76□□□□□ -1.65
COL2A1P02458 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.76□□□□□ -1.65
COL2A1P02458 MIR4760-201ENST00000585040 80 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.76□□□□□ -1.65
COL2A1P02458 AC005255.1-201ENST00000593748 216 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.76□□□□□ -1.65
COL2A1P02458 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.76□□□□□ -1.65
COL2A1P02458 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.76□□□□□ -1.65
COL2A1P02458 AL357094.1-201ENST00000603845 844 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 AC096553.1-201ENST00000605169 829 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
COL2A1P02458 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL2A1P02458 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL2A1P02458 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL2A1P02458 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.76□□□□□ -1.65
COL2A1P02458 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL2A1P02458 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
COL2A1P02458 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.76□□□□□ -1.65
COL2A1P02458 Z95327.2-201ENST00000414579 1873 ntBASIC4.76□□□□□ -1.65
COL2A1P02458 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 RNA5SP399-201ENST00000364003 117 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 VDAC2P1-201ENST00000399358 958 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.75□□□□□ -1.65
COL2A1P02458 AC092691.2-201ENST00000461787 803 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 AC016550.3-201ENST00000515706 767 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 RNU6-352P-201ENST00000516908 107 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.75□□□□□ -1.65
COL2A1P02458 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.75□□□□□ -1.65
COL2A1P02458 AC068993.1-201ENST00000546724 589 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 MIR3124-201ENST00000582636 67 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 OR51C1P-201ENST00000608504 942 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 AC097655.1-201ENST00000635075 318 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL2A1P02458 RNU1-15P-201ENST00000353977 144 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 RAB9AP3-201ENST00000412737 573 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 PGBD4P8-201ENST00000412993 562 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.75□□□□□ -1.65
COL2A1P02458 AC091286.1-201ENST00000431233 461 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms