Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 HMGB3P21-201ENST00000452483 547 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 RPS29P33-201ENST00000456717 146 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.05□□□□□ -1.76
SEMA3DO95025 AC096741.1-201ENST00000472250 846 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 RN7SL691P-201ENST00000494487 301 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.05□□□□□ -1.76
SEMA3DO95025 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.05□□□□□ -1.76
SEMA3DO95025 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.05□□□□□ -1.76
SEMA3DO95025 CDH12P4-201ENST00000517835 295 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 CDH12P3-201ENST00000517935 295 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 CDH12P1-201ENST00000518435 295 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.05□□□□□ -1.76
SEMA3DO95025 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.05□□□□□ -1.76
SEMA3DO95025 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.05□□□□□ -1.76
SEMA3DO95025 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.05□□□□□ -1.76
SEMA3DO95025 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.05□□□□□ -1.76
SEMA3DO95025 MIR4330-201ENST00000579077 105 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.05□□□□□ -1.76
SEMA3DO95025 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.05□□□□□ -1.76
SEMA3DO95025 RN7SL722P-201ENST00000617780 284 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 RN7SL565P-201ENST00000618246 284 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 AL445363.3-201ENST00000623080 671 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 AC008785.1-201ENST00000624475 456 ntBASIC4.05□□□□□ -1.76
SEMA3DO95025 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SEMA3DO95025 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
SEMA3DO95025 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SEMA3DO95025 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SEMA3DO95025 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SEMA3DO95025 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SEMA3DO95025 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SEMA3DO95025 AC073429.2-201ENST00000569694 1444 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.04□□□□□ -1.76
SEMA3DO95025 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SEMA3DO95025 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SEMA3DO95025 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.04□□□□□ -1.76
SEMA3DO95025 AC010132.2-201ENST00000295493 1043 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 RNU6-697P-201ENST00000363348 107 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 RNU4-7P-201ENST00000364758 141 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SEMA3DO95025 RN7SKP235-201ENST00000410662 305 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.04□□□□□ -1.76
SEMA3DO95025 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.04□□□□□ -1.76
SEMA3DO95025 MFSD13B-201ENST00000420133 1290 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC093698.1-201ENST00000423843 571 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC073069.1-201ENST00000428657 441 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC023141.6-201ENST00000429418 337 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.04□□□□□ -1.76
SEMA3DO95025 FTH1P6-201ENST00000430768 320 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.04□□□□□ -1.76
SEMA3DO95025 SNRPGP5-201ENST00000456003 220 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 METTL15P1-201ENST00000481421 1045 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
SEMA3DO95025 AC025674.1-201ENST00000507074 324 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC017037.1-201ENST00000508460 471 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 IGHV3-63-201ENST00000518422 341 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.04□□□□□ -1.76
SEMA3DO95025 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.04□□□□□ -1.76
SEMA3DO95025 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.04□□□□□ -1.76
SEMA3DO95025 TRAV8-5-201ENST00000537369 341 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC107016.1-201ENST00000550463 337 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.04□□□□□ -1.76
SEMA3DO95025 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.04□□□□□ -1.76
SEMA3DO95025 AC104785.1-201ENST00000603220 588 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC138473.1-201ENST00000605717 526 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.04□□□□□ -1.76
SEMA3DO95025 AC015922.4-201ENST00000612568 690 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC009318.3-201ENST00000616916 503 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AL356274.1-201ENST00000617064 410 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AC233309.1-201ENST00000619522 751 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AL359715.5-201ENST00000623431 443 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.04□□□□□ -1.76
SEMA3DO95025 AC097504.1-201ENST00000515103 2415 ntBASIC4.04□□□□□ -1.76
SEMA3DO95025 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
SEMA3DO95025 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SEMA3DO95025 MAPK10-373ENST00000641983 6772 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 AL158163.1-201ENST00000603915 1649 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 MTCO1P14-201ENST00000441695 1559 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SEMA3DO95025 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 MIR585-201ENST00000384887 94 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 ZNF603P-201ENST00000405613 487 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 RN7SKP177-201ENST00000410567 355 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 RPL37P18-201ENST00000411602 243 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.03□□□□□ -1.76
SEMA3DO95025 RCC2P2-201ENST00000422174 918 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.03□□□□□ -1.76
SEMA3DO95025 HMGB3P22-202ENST00000451823 572 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 AC009963.2-201ENST00000453431 138 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 RN7SL585P-201ENST00000470538 280 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 RPS29P19-201ENST00000479709 171 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 AC006517.1-201ENST00000480485 328 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 AC013356.1-201ENST00000489027 564 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 AC106872.2-201ENST00000494303 480 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms