Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL355333.1-201ENST00000605632 279 ntBASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 AC019193.3-201ENST00000609144 554 ntBASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 AP001052.1-201ENST00000626421 99 ntBASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 DLEU2L-201ENST00000371086 3555 ntBASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 AC011493.1-201ENST00000596753 1632 ntBASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 AC011933.2-201ENST00000578539 2790 ntBASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIMD1Q9UGP4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC067945.1-201ENST00000342609 618 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 Y_RNA.197-201ENST00000364004 102 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 RNA5SP433-201ENST00000364491 114 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 Y_RNA.367-201ENST00000365544 101 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC117470.1-201ENST00000381974 330 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 SNORA22B-201ENST00000383876 138 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 MIR454-201ENST00000390180 115 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 RPL5P5-201ENST00000392009 893 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AL583835.1-201ENST00000399570 407 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 PSMA6P1-201ENST00000400275 741 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 RPL5P34-201ENST00000426545 891 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 RPL34P6-201ENST00000432390 345 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 YWHAZP8-201ENST00000436935 731 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 TRAPPC2P3-201ENST00000443200 321 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 SDHCP3-201ENST00000445371 506 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC005297.2-201ENST00000450430 606 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AL035090.1-201ENST00000454835 332 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 VN1R17P-201ENST00000472048 1090 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 RPL5P22-201ENST00000480199 884 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC055855.1-201ENST00000489563 579 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC096754.1-201ENST00000508904 818 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC018797.3-201ENST00000513388 1241 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 Y_RNA.720-201ENST00000517166 92 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 RPL7P20-201ENST00000520308 745 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC087752.2-201ENST00000521219 281 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 TRIM51DP-201ENST00000529746 596 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AL163153.1-201ENST00000554223 283 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC005519.1-201ENST00000554490 601 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 RN7SL199P-201ENST00000578752 281 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 RN7SL656P-201ENST00000579044 281 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 RN7SL270P-201ENST00000579643 281 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 GLUD1P4-201ENST00000590914 418 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 APOOP1-201ENST00000604695 592 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AL122125.1-201ENST00000616999 600 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AC010325.3-201ENST00000641084 394 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms