Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 TPT1P2-201ENST00000413105 503 ntBASIC3.84□□□□□ -1.79
CCDC88CQ9P219 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 RPL23AP2-201ENST00000471227 466 ntBASIC3.84□□□□□ -1.79
CCDC88CQ9P219 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 AC091516.1-201ENST00000549191 703 ntBASIC3.84□□□□□ -1.79
CCDC88CQ9P219 CCNG2P1-201ENST00000549521 1000 ntBASIC3.84□□□□□ -1.79
CCDC88CQ9P219 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 AC099669.2-201ENST00000616549 437 ntBASIC3.84□□□□□ -1.79
CCDC88CQ9P219 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 MIR6500-201ENST00000622700 86 ntBASIC3.84□□□□□ -1.79
CCDC88CQ9P219 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC88CQ9P219 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC88CQ9P219 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
CCDC88CQ9P219 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
CCDC88CQ9P219 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 MIR448-201ENST00000362131 111 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 MIR208A-201ENST00000362287 71 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 RNU6-213P-201ENST00000384051 104 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC104306.1-201ENST00000449702 371 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC007537.2-201ENST00000472093 511 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 RPS3AP6-201ENST00000484430 795 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC079171.1-201ENST00000568788 914 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 MIR4429-201ENST00000580105 73 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 MFSD8-242ENST00000641690 4199 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC100871.1-201ENST00000507871 1456 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 SNORA3C-201ENST00000408792 125 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 ATP5HP2-201ENST00000433885 485 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 RPS29P7-201ENST00000439662 171 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 YWHAQP9-201ENST00000445891 512 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC091564.1-201ENST00000464563 479 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 CYP4A43P-201ENST00000568156 121 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC005255.1-201ENST00000593748 216 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC068790.5-201ENST00000602741 355 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AP000255.1-201ENST00000610276 676 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AC074140.1-201ENST00000621617 208 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 AL356863.1-201ENST00000623378 1080 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 FAM91A3P-201ENST00000456826 2544 ntBASIC3.83□□□□□ -1.8
CCDC88CQ9P219 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC88CQ9P219 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 AL359837.1-201ENST00000381357 287 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 AL133547.1-201ENST00000448546 220 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms