Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 RNU1-85P-201ENST00000364127 164 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 RPL23AP48-201ENST00000406913 488 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 RNA5SP104-201ENST00000410989 118 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AL592293.2-201ENST00000422292 996 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 MTND2P11-201ENST00000423638 648 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC004975.1-201ENST00000428733 208 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AL132765.1-201ENST00000434165 553 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 TPTE2P3-201ENST00000441562 1189 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 EIF4A1P11-201ENST00000451239 222 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 Z95152.1-201ENST00000453556 656 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AL161747.1-201ENST00000480068 358 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 PRELID3BP7-201ENST00000503606 469 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC099522.1-202ENST00000514718 367 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 RNU6-751P-201ENST00000516382 101 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC022784.5-201ENST00000522241 437 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC105233.3-201ENST00000531125 744 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 MTATP6P25-201ENST00000574491 261 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 MIR3160-1-201ENST00000577972 85 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 RN7SL600P-201ENST00000581811 299 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC093227.2-201ENST00000589357 285 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 MIR6716-201ENST00000613413 80 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC067852.7-201ENST00000623270 535 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AP000843.1-201ENST00000624880 701 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 IQCB2P-201ENST00000401788 1633 ntBASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO3Q9BXY4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC099336.2-201ENST00000422457 254 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC007064.3-201ENST00000422608 359 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC234779.1-201ENST00000425910 285 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AL158073.1-201ENST00000426848 1104 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 MTCO3P17-201ENST00000443775 513 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 NDUFS5P3-201ENST00000450668 321 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC133473.1-201ENST00000455173 299 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 RPL7P32-201ENST00000457119 744 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC099560.2-201ENST00000457554 255 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC025445.1-201ENST00000502728 300 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 VWA8P1-201ENST00000510889 176 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 KCTD9P2-201ENST00000512203 1013 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 OR1AB1P-201ENST00000585564 761 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AL135786.2-201ENST00000608422 615 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC114781.5-201ENST00000615297 108 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC090246.1-201ENST00000616499 426 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AL121890.3-201ENST00000618494 516 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC074276.2-201ENST00000619891 348 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 AC012020.1-201ENST00000624541 1728 ntBASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RSPO3Q9BXY4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms