Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC023128.2-201ENST00000420880 1223 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AL109913.1-201ENST00000421173 514 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC007563.3-201ENST00000433233 371 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 UBE2V1P8-201ENST00000437166 265 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 ARAFP2-201ENST00000440565 559 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 MRPL42P4-201ENST00000453267 443 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 CCDC75P1-201ENST00000469247 791 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 RPS24P16-201ENST00000497294 392 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC084024.2-201ENST00000503480 791 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC021087.2-201ENST00000504656 1203 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 PRDX4P1-201ENST00000507189 574 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-943P-201ENST00000516960 98 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 NPM1P6-201ENST00000521088 871 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AP003392.2-201ENST00000527269 208 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC118273.2-201ENST00000532092 465 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 OR10G5P-201ENST00000532733 358 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AP004607.2-201ENST00000533949 322 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 GLYCAM1-201ENST00000546596 285 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AADACP1-206ENST00000561502 1193 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC119501.1-201ENST00000603646 475 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC096553.1-201ENST00000605169 829 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC008945.2-201ENST00000606056 604 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 Z95327.3-201ENST00000610385 572 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 Y_RNA.804-201ENST00000615262 101 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC139769.3-201ENST00000618383 175 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AL607023.1-201ENST00000620045 248 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC008443.7-201ENST00000622195 246 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 GVINP1-202ENST00000531871 7271 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AL078621.3-201ENST00000623707 2042 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AL355852.1-201ENST00000454081 1771 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC114774.1-201ENST00000507410 1770 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 HSPD1P11-201ENST00000508643 1702 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC006206.1-201ENST00000544842 3387 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 OR4G2P-201ENST00000328113 903 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 RN7SKP185-201ENST00000362813 326 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-1011P-201ENST00000384668 107 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 SNORA40.2-201ENST00000390847 128 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 PNRC2P1-201ENST00000423940 420 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 BX276092.6-201ENST00000430476 250 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 OR52B5P-201ENST00000435337 951 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 RPS27P5-201ENST00000444247 244 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC239798.3-201ENST00000454459 408 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 BX276092.8-201ENST00000455722 250 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 RN7SL197P-201ENST00000466981 299 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 RPS4XP1-201ENST00000482189 787 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 NCOR1P1-202ENST00000486162 291 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC022133.1-201ENST00000490961 571 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-319P-201ENST00000516025 108 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms