Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC090515.3-201ENST00000560431 315 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC012603.1-201ENST00000606424 528 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC007546.1-201ENST00000619452 559 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 AC018555.1-201ENST00000567548 1980 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.01□□□□□ -1.77
COL21A1Q96P44 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 EIF2AP4-201ENST00000424793 1781 ntBASIC4.01□□□□□ -1.77
COL21A1Q96P44 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL21A1Q96P44 MAPK10-253ENST00000641010 4072 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL21A1Q96P44 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4□□□□□ -1.77
COL21A1Q96P44 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL21A1Q96P44 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4□□□□□ -1.77
COL21A1Q96P44 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL21A1Q96P44 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
COL21A1Q96P44 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL21A1Q96P44 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4□□□□□ -1.77
COL21A1Q96P44 OR4K17-201ENST00000315543 1032 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 RNU6-984P-201ENST00000363236 109 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 RNA5SP509-201ENST00000364577 119 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 RNU6-891P-201ENST00000384280 111 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 MT-TP-201ENST00000387461 68 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4□□□□□ -1.77
COL21A1Q96P44 RNA5SP306-201ENST00000411087 107 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 AC011933.1-201ENST00000413334 321 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4□□□□□ -1.77
COL21A1Q96P44 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4□□□□□ -1.77
COL21A1Q96P44 RPL18P10-201ENST00000425606 538 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 AC093716.1-201ENST00000435923 377 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 MTCYBP29-201ENST00000436327 1006 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4□□□□□ -1.77
COL21A1Q96P44 FHP1-201ENST00000442741 703 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 EIF2S2P2-201ENST00000447161 982 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 AC116533.1-201ENST00000459748 321 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4□□□□□ -1.77
COL21A1Q96P44 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
COL21A1Q96P44 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4□□□□□ -1.77
COL21A1Q96P44 AC010374.1-201ENST00000503762 1237 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL21A1Q96P44 AC034205.1-201ENST00000520621 638 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 C1GALT1P3-201ENST00000522049 819 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 AC021483.2-201ENST00000567415 758 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4□□□□□ -1.77
COL21A1Q96P44 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4□□□□□ -1.77
COL21A1Q96P44 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4□□□□□ -1.77
COL21A1Q96P44 AC245389.2-201ENST00000616023 576 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 AC242843.1-201ENST00000618702 573 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 AL450326.2-201ENST00000421913 1962 ntBASIC4□□□□□ -1.77
COL21A1Q96P44 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL21A1Q96P44 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL21A1Q96P44 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL21A1Q96P44 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL21A1Q96P44 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL21A1Q96P44 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 RNU6-225P-201ENST00000384613 103 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 ST13P16-201ENST00000401760 781 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 NCSTNP1-201ENST00000406229 144 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC092647.1-201ENST00000420654 287 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 MTND2P11-201ENST00000423638 648 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 CEACAMP1-201ENST00000434624 1035 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 RPL23AP52-201ENST00000439311 478 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 CBX1P1-201ENST00000440184 427 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 AL512326.1-201ENST00000443050 721 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 VN1R48P-201ENST00000448149 1036 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC243772.1-201ENST00000451620 410 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC104629.2-201ENST00000468627 598 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC021205.1-201ENST00000468797 348 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC104164.2-201ENST00000496953 495 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 ATG10-AS1-201ENST00000504846 648 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC025674.1-201ENST00000507074 324 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 SNORA70.17-201ENST00000516449 133 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 IGLVIV-53-201ENST00000520107 367 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms