Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 S100A11P1-201ENST00000477525 312 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 RN7SL319P-201ENST00000480656 221 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFT1Q96AA3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC008494.2-201ENST00000514544 370 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 RNU6-709P-201ENST00000517257 104 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 HMGB1P23-201ENST00000518743 568 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 OR4A2P-201ENST00000527276 913 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC100770.1-201ENST00000532310 322 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC068339.2-201ENST00000534395 618 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 AL049839.1-201ENST00000556151 657 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFT1Q96AA3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 MIR4691-201ENST00000583764 85 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 DNAJC19P3-201ENST00000594491 331 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC011445.2-201ENST00000599274 173 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC025946.2-201ENST00000603398 234 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 OR6R2P-201ENST00000609216 300 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC023509.5-201ENST00000617434 807 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 RMST_9.1-201ENST00000619945 193 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 LINC01808-202ENST00000641680 1116 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFT1Q96AA3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.17□□□□□ -1.74
RFT1Q96AA3 AL136520.1-201ENST00000600311 1322 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.17□□□□□ -1.74
RFT1Q96AA3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFT1Q96AA3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RFT1Q96AA3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RFT1Q96AA3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFT1Q96AA3 MIR3074-201ENST00000384885 81 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 MIR223-201ENST00000385204 110 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFT1Q96AA3 AL021331.1-201ENST00000402817 582 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 AP000534.2-201ENST00000412729 568 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 FO393414.1-201ENST00000428697 1184 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 PRPF38AP2-201ENST00000438179 851 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC092809.1-201ENST00000441469 474 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC011753.3-201ENST00000443436 406 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 RPS17P11-201ENST00000474297 293 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC090114.3-201ENST00000479267 829 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC079841.1-201ENST00000481228 950 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 RPS6P4-201ENST00000494693 758 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RFT1Q96AA3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 RN7SKP283-201ENST00000517197 270 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 AP003102.1-201ENST00000525638 661 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFT1Q96AA3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFT1Q96AA3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC011611.5-201ENST00000552477 578 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC063949.1-201ENST00000552900 865 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 OR4U1P-201ENST00000554958 912 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 TVP23CP2-201ENST00000571473 623 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 MIR4512-201ENST00000583257 77 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 AP002906.1-201ENST00000603405 233 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.16□□□□□ -1.74
RFT1Q96AA3 AC007529.1-201ENST00000418574 2178 ntBASIC4.16□□□□□ -1.74
RFT1Q96AA3 BRAFP1-201ENST00000445336 2703 ntBASIC4.15□□□□□ -1.74
RFT1Q96AA3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
RFT1Q96AA3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.15□□□□□ -1.74
RFT1Q96AA3 AC119744.1-201ENST00000454746 1715 ntBASIC4.15□□□□□ -1.74
RFT1Q96AA3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RFT1Q96AA3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
RFT1Q96AA3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RFT1Q96AA3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
RFT1Q96AA3 AC015813.6-201ENST00000624409 5808 ntBASIC4.15□□□□□ -1.75
RFT1Q96AA3 OR56B2P-201ENST00000317102 954 ntBASIC4.15□□□□□ -1.75
RFT1Q96AA3 RNA5SP428-201ENST00000365129 132 ntBASIC4.15□□□□□ -1.75
RFT1Q96AA3 RNU6-932P-201ENST00000391108 106 ntBASIC4.15□□□□□ -1.75
RFT1Q96AA3 GJA6P-201ENST00000415117 1042 ntBASIC4.15□□□□□ -1.75
RFT1Q96AA3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.15□□□□□ -1.75
RFT1Q96AA3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.15□□□□□ -1.75
RFT1Q96AA3 RPL7P57-201ENST00000423238 740 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms