Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNU6-225P-201ENST00000384613 103 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 SSXP10-201ENST00000402595 565 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 VDAC1P9-201ENST00000412766 841 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AL354707.3-201ENST00000427308 331 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 RPSAP65-201ENST00000429660 595 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 NRBF2P3-201ENST00000432731 865 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.14□□□□□ -1.27
HLA-CQ95604 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AC073109.1-201ENST00000445066 978 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 PFN1P11-201ENST00000445829 389 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AL139805.2-201ENST00000455305 2433 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AC128713.1-201ENST00000471495 306 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AL049874.2-201ENST00000492636 288 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AC021146.1-201ENST00000511202 716 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 EIF3KP3-201ENST00000514461 639 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.14□□□□□ -1.27
HLA-CQ95604 TRIM77BP-201ENST00000524985 1119 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AC090022.1-201ENST00000546569 311 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC7.14□□□□□ -1.27
HLA-CQ95604 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AC116158.1-201ENST00000560231 2129 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 ACTG1P15-201ENST00000570019 1063 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 AC006141.1-201ENST00000581917 2170 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 BNIP3P25-201ENST00000596023 559 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 AC013244.1-201ENST00000604279 193 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 uc_338.9-201ENST00000617424 182 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 AC129502.1-201ENST00000623261 1654 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-CQ95604 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.14□□□□□ -1.27
HLA-CQ95604 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-CQ95604 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.13□□□□□ -1.27
HLA-CQ95604 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.13□□□□□ -1.27
HLA-CQ95604 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-CQ95604 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.13□□□□□ -1.27
HLA-CQ95604 MIR323A-201ENST00000362199 86 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 Y_RNA.252-201ENST00000364556 101 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 Y_RNA.489-201ENST00000384410 101 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 RNU6-1026P-201ENST00000384465 108 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 MIR558-201ENST00000384920 94 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 AL078604.1-201ENST00000404609 466 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 RNU6-1304P-201ENST00000411374 106 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-CQ95604 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-CQ95604 MED13P1-201ENST00000428342 171 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 AC114495.1-201ENST00000441274 436 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 PTMAP1-205ENST00000455552 325 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 RNU7-180P-201ENST00000459240 63 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 AC022415.1-202ENST00000486612 523 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 AC091849.1-201ENST00000509920 121 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-CQ95604 RNA5SP454-201ENST00000517231 127 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
HLA-CQ95604 LSM3P2-201ENST00000551246 273 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 TVP23CP2-201ENST00000571473 623 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 AC040162.2-201ENST00000573092 157 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 LARP7P2-201ENST00000575306 125 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-CQ95604 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-CQ95604 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.13□□□□□ -1.27
HLA-CQ95604 AC244100.1-202ENST00000621554 382 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 NAA50-211ENST00000630058 177 ntTSL 5 BASIC7.13□□□□□ -1.27
HLA-CQ95604 OR52H1-202ENST00000641796 1061 ntBASIC7.13□□□□□ -1.27
HLA-CQ95604 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HLA-CQ95604 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms