Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU2-50P-201ENST00000410494 143 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 TBCAP2-201ENST00000416175 326 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 GTF2IP2-201ENST00000424290 697 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AL031663.1-201ENST00000437445 219 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 CBX1P4-201ENST00000439415 457 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 HMGB3P6-201ENST00000444896 598 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 DNAJC19P8-201ENST00000452887 259 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 GYG1P1-201ENST00000460864 698 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC006967.1-201ENST00000467608 589 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC006463.2-201ENST00000473326 348 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 RPS27AP18-201ENST00000515536 459 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 SETP1-201ENST00000556014 845 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC233702.9-201ENST00000581528 203 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC022022.2-201ENST00000602989 360 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC023813.4-201ENST00000607580 580 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AL049794.2-201ENST00000616301 365 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC010975.3-201ENST00000618727 978 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC022106.2-201ENST00000620114 757 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC092079.1-201ENST00000558620 1985 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 SNORA73.1-201ENST00000363107 205 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 OR52E6-202ENST00000379946 954 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 RN7SKP16-201ENST00000410180 299 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 RN7SKP100-201ENST00000411258 284 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AL807761.1-201ENST00000417622 171 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 XKRYP1-201ENST00000423438 492 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 XKRYP2-201ENST00000432915 492 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 RPL7AP61-201ENST00000443410 636 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC073264.2-201ENST00000448886 166 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC091959.2-201ENST00000477363 321 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AL161747.1-201ENST00000480068 358 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AL035404.1-201ENST00000497982 568 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC138938.1-201ENST00000515431 782 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 RN7SKP287-201ENST00000516546 266 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 RNA5SP392-201ENST00000516905 112 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC010306.1-201ENST00000523223 1117 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC079075.1-201ENST00000559543 878 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 MTCO1P40-201ENST00000574371 625 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 VN1R88P-201ENST00000596787 292 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms