Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC084757.1-201ENST00000559987 490 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 BNIP3P26-201ENST00000600827 554 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 MTCO2P22-201ENST00000603246 681 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC008814.1-201ENST00000603797 406 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 ELOCP34-201ENST00000604436 327 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC010857.1-201ENST00000606398 594 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC008083.4-201ENST00000615076 444 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AL355480.1-201ENST00000629041 99 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 PCMTD1P7-201ENST00000634506 357 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC099654.12-201ENST00000639868 649 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 MFSD8-245ENST00000641743 948 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VRK3Q8IV63 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.16□□□□□ -1.58
VRK3Q8IV63 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.16□□□□□ -1.58
VRK3Q8IV63 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.15□□□□□ -1.58
VRK3Q8IV63 AC011493.1-201ENST00000596753 1632 ntBASIC5.15□□□□□ -1.58
VRK3Q8IV63 AC092747.4-201ENST00000620519 1861 ntBASIC5.15□□□□□ -1.58
VRK3Q8IV63 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.15□□□□□ -1.58
VRK3Q8IV63 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.15□□□□□ -1.58
VRK3Q8IV63 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VRK3Q8IV63 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VRK3Q8IV63 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VRK3Q8IV63 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VRK3Q8IV63 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.15□□□□□ -1.58
VRK3Q8IV63 AC010132.2-201ENST00000295493 1043 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 Y_RNA.303-201ENST00000364998 94 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 MIR589-201ENST00000385238 99 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 MTCO1P17-201ENST00000411522 491 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 RPL7P8-201ENST00000411964 730 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC010385.1-201ENST00000412374 256 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 EI24P4-201ENST00000423683 1078 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AL022400.1-201ENST00000423946 935 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 HSPD1P12-201ENST00000429127 1069 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 CLUHP1-201ENST00000435012 1190 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 OR52B5P-201ENST00000435337 951 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AL157827.1-201ENST00000447622 132 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 ST13P20-201ENST00000447996 1065 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC079168.1-201ENST00000458741 345 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AP000797.2-201ENST00000475768 606 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC147055.4-201ENST00000504399 745 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AL049779.2-201ENST00000553847 315 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 NPM1P47-201ENST00000560843 856 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC007225.2-201ENST00000562529 256 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC092325.1-201ENST00000566449 554 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 MIR3912-201ENST00000577566 105 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 RN7SL753P-201ENST00000581238 290 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC008507.1-201ENST00000587506 734 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC083899.3-201ENST00000603413 594 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC006363.1-201ENST00000603806 463 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AL592221.1-201ENST00000605266 382 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC011374.2-201ENST00000607135 526 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AL391497.1-201ENST00000608671 547 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VRK3Q8IV63 MIR6839-201ENST00000620425 113 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC127502.3-201ENST00000636170 1206 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC074101.1-201ENST00000637861 241 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 OR52B5P-202ENST00000641118 1110 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VRK3Q8IV63 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VRK3Q8IV63 AC235565.1-201ENST00000456962 1325 ntBASIC5.15□□□□□ -1.59
VRK3Q8IV63 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
VRK3Q8IV63 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms