Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC027228.2-201ENST00000567141 2154 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AC026523.2-201ENST00000625039 7739 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 PPIAP31-201ENST00000405422 495 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 MIR1193-201ENST00000408109 78 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 RN7SKP182-201ENST00000410772 298 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 CEACAMP1-201ENST00000434624 1035 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AC020898.1-201ENST00000474167 787 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AC108729.2-201ENST00000476543 840 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 BNIP3P41-201ENST00000503774 571 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AC138409.2-202ENST00000507274 458 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 FABP5P6-201ENST00000510588 409 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AC105233.3-201ENST00000531125 744 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AC133794.1-201ENST00000602731 914 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 RPAP2P1-201ENST00000603626 1168 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 AL138955.1-201ENST00000622881 1040 ntBASIC5.16□□□□□ -1.58
PDS5AQ29RF7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDS5AQ29RF7 AP001273.1-201ENST00000624493 3152 ntBASIC5.15□□□□□ -1.58
PDS5AQ29RF7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDS5AQ29RF7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDS5AQ29RF7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDS5AQ29RF7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.15□□□□□ -1.58
PDS5AQ29RF7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 RNU6-650P-201ENST00000365658 111 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 AC007068.1-201ENST00000396690 844 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 MORF4L1P7-201ENST00000426038 703 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 MRPL50P1-201ENST00000431951 384 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 ARL4AP3-201ENST00000441452 574 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 ABCF2P2-201ENST00000450549 296 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 RPL5P32-201ENST00000454085 879 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 AC022795.1-201ENST00000473808 480 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 SNORA76.2-201ENST00000517095 137 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 RPL21P7-201ENST00000557463 483 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 TVP23BP1-201ENST00000557500 617 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 AC233266.2-201ENST00000567067 528 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 AC026979.4-201ENST00000606555 645 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 AC104763.3-201ENST00000613765 618 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 MIR7151-201ENST00000617477 60 ntBASIC5.15□□□□□ -1.59
PDS5AQ29RF7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDS5AQ29RF7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 MIR195-201ENST00000385194 87 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 MIR1179-201ENST00000408703 91 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 RN7SKP199-201ENST00000410325 305 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 CEACAMP8-201ENST00000413902 580 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 AC004448.2-201ENST00000422360 586 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 RPS27AP15-201ENST00000447672 466 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 SEPT7P3-201ENST00000455017 621 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 RPL7P22-201ENST00000466005 733 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 RN7SL817P-201ENST00000480777 288 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 ARL4AP1-201ENST00000503220 705 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 GOLGA5P1-201ENST00000507317 980 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDS5AQ29RF7 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.14□□□□□ -1.59
PDS5AQ29RF7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms