Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 USP9YP4-201ENST00000424401 1745 ntBASIC3.63□□□□□ -1.83
UBA52P62987 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.63□□□□□ -1.83
UBA52P62987 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
UBA52P62987 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBA52P62987 OR11H5P-202ENST00000641612 1325 ntBASIC3.63□□□□□ -1.83
UBA52P62987 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.62□□□□□ -1.83
UBA52P62987 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.62□□□□□ -1.83
UBA52P62987 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.62□□□□□ -1.83
UBA52P62987 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 CPHL1P-201ENST00000461341 3407 ntBASIC3.62□□□□□ -1.83
UBA52P62987 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.62□□□□□ -1.83
UBA52P62987 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 RNA5SP366-201ENST00000365454 123 ntBASIC3.62□□□□□ -1.83
UBA52P62987 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.62□□□□□ -1.83
UBA52P62987 MIR1911-201ENST00000410783 80 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.62□□□□□ -1.83
UBA52P62987 RBMY1KP-201ENST00000423480 476 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC115285.1-201ENST00000424879 736 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.62□□□□□ -1.83
UBA52P62987 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.62□□□□□ -1.83
UBA52P62987 AC091167.1-201ENST00000492017 396 ntBASIC3.62□□□□□ -1.83
UBA52P62987 RPS27AP16-201ENST00000492222 470 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC010342.1-201ENST00000514047 877 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.62□□□□□ -1.83
UBA52P62987 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.62□□□□□ -1.83
UBA52P62987 AP003730.1-201ENST00000524605 285 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC135001.1-201ENST00000544546 283 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.62□□□□□ -1.83
UBA52P62987 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.62□□□□□ -1.83
UBA52P62987 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.62□□□□□ -1.83
UBA52P62987 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.62□□□□□ -1.83
UBA52P62987 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.62□□□□□ -1.83
UBA52P62987 MIR4644-201ENST00000579929 84 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.62□□□□□ -1.83
UBA52P62987 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.62□□□□□ -1.83
UBA52P62987 BNIP3P22-201ENST00000593399 556 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC005034.4-201ENST00000603612 899 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC128687.2-201ENST00000609657 566 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC015908.5-201ENST00000623289 343 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC138907.10-201ENST00000623708 983 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC034229.5-201ENST00000624258 185 ntBASIC3.62□□□□□ -1.83
UBA52P62987 HSPA8P1-201ENST00000425843 1833 ntBASIC3.62□□□□□ -1.83
UBA52P62987 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
UBA52P62987 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
UBA52P62987 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.62□□□□□ -1.83
UBA52P62987 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.62□□□□□ -1.83
UBA52P62987 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.62□□□□□ -1.83
UBA52P62987 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.62□□□□□ -1.83
UBA52P62987 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBA52P62987 ASNSP1-201ENST00000518311 1939 ntBASIC3.62□□□□□ -1.83
UBA52P62987 AC005261.4-201ENST00000600047 1385 ntBASIC3.62□□□□□ -1.83
UBA52P62987 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
UBA52P62987 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBA52P62987 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.61□□□□□ -1.83
UBA52P62987 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBA52P62987 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
UBA52P62987 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBA52P62987 OR5P1P-201ENST00000299512 925 ntBASIC3.61□□□□□ -1.83
UBA52P62987 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBA52P62987 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBA52P62987 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.61□□□□□ -1.83
UBA52P62987 AL359837.1-201ENST00000381357 287 ntBASIC3.61□□□□□ -1.83
UBA52P62987 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.61□□□□□ -1.83
UBA52P62987 AL607077.1-201ENST00000401718 499 ntBASIC3.61□□□□□ -1.83
UBA52P62987 Z98941.1-201ENST00000407764 100 ntBASIC3.61□□□□□ -1.83
UBA52P62987 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.61□□□□□ -1.83
UBA52P62987 AP001324.1-201ENST00000428553 399 ntBASIC3.61□□□□□ -1.83
UBA52P62987 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.61□□□□□ -1.83
UBA52P62987 RPL23AP89-201ENST00000439324 255 ntBASIC3.61□□□□□ -1.83
UBA52P62987 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.61□□□□□ -1.83
UBA52P62987 EXTL2P1-201ENST00000446218 416 ntBASIC3.61□□□□□ -1.83
UBA52P62987 FABP3P2-201ENST00000453169 399 ntBASIC3.61□□□□□ -1.83
UBA52P62987 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.61□□□□□ -1.83
UBA52P62987 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.61□□□□□ -1.83
UBA52P62987 MED28P5-201ENST00000528254 438 ntBASIC3.61□□□□□ -1.83
UBA52P62987 RFPL1S-203ENST00000539579 330 ntBASIC3.61□□□□□ -1.83
UBA52P62987 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBA52P62987 AC009101.1-201ENST00000568135 242 ntBASIC3.61□□□□□ -1.83
UBA52P62987 AC079171.1-201ENST00000568788 914 ntBASIC3.61□□□□□ -1.83
UBA52P62987 AC068020.1-201ENST00000594215 661 ntBASIC3.61□□□□□ -1.83
UBA52P62987 AC090948.2-201ENST00000607363 564 ntBASIC3.61□□□□□ -1.83
UBA52P62987 MIR92B-201ENST00000607575 96 ntBASIC3.61□□□□□ -1.83
UBA52P62987 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.61□□□□□ -1.83
UBA52P62987 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBA52P62987 AC004825.2-201ENST00000616634 455 ntBASIC3.61□□□□□ -1.83
UBA52P62987 AL645927.2-201ENST00000618350 349 ntBASIC3.61□□□□□ -1.83
UBA52P62987 AC067852.7-201ENST00000623270 535 ntBASIC3.61□□□□□ -1.83
UBA52P62987 AC006065.6-201ENST00000625201 545 ntBASIC3.61□□□□□ -1.83
UBA52P62987 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBA52P62987 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.61□□□□□ -1.83
UBA52P62987 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms