Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PKNOX1P55347 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PKNOX1P55347 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PKNOX1P55347 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.12□□□□□ -1.75
PKNOX1P55347 RNA5SP513-201ENST00000364648 118 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 MIR129-1-201ENST00000384972 72 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 MIR323B-201ENST00000385269 82 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PKNOX1P55347 RPS3AP23-201ENST00000401762 784 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AP000357.1-201ENST00000409926 1165 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.12□□□□□ -1.75
PKNOX1P55347 RPEP3-201ENST00000425462 676 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.12□□□□□ -1.75
PKNOX1P55347 NDUFA5P10-201ENST00000432147 357 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 RPS20P1-201ENST00000434853 354 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.12□□□□□ -1.75
PKNOX1P55347 FTH1P16-201ENST00000435241 552 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.12□□□□□ -1.75
PKNOX1P55347 AC006466.1-201ENST00000438721 289 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.12□□□□□ -1.75
PKNOX1P55347 AL157827.1-201ENST00000447622 132 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.12□□□□□ -1.75
PKNOX1P55347 NDUFS5P3-201ENST00000450668 321 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.12□□□□□ -1.75
PKNOX1P55347 METTL15P1-201ENST00000481421 1045 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.12□□□□□ -1.75
PKNOX1P55347 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PKNOX1P55347 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.12□□□□□ -1.75
PKNOX1P55347 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PKNOX1P55347 AC016550.3-201ENST00000515706 767 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 RNA5SP73-201ENST00000516744 108 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.12□□□□□ -1.75
PKNOX1P55347 AP006289.1-201ENST00000538089 277 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.12□□□□□ -1.75
PKNOX1P55347 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.12□□□□□ -1.75
PKNOX1P55347 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.12□□□□□ -1.75
PKNOX1P55347 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.12□□□□□ -1.75
PKNOX1P55347 AC010200.2-201ENST00000605098 235 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.12□□□□□ -1.75
PKNOX1P55347 AC135803.1-201ENST00000608748 565 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PKNOX1P55347 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.12□□□□□ -1.75
PKNOX1P55347 RMST_9.1-201ENST00000619945 193 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AC104820.1-201ENST00000624183 307 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AL355480.1-201ENST00000629041 99 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.12□□□□□ -1.75
PKNOX1P55347 OR5AC4P-202ENST00000642086 985 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AC092162.3-201ENST00000624511 1624 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 OR11H5P-202ENST00000641612 1325 ntBASIC4.12□□□□□ -1.75
PKNOX1P55347 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PKNOX1P55347 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PKNOX1P55347 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKNOX1P55347 Z73965.1-201ENST00000623412 2297 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PKNOX1P55347 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PKNOX1P55347 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKNOX1P55347 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKNOX1P55347 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PKNOX1P55347 PNPT1P2-201ENST00000456768 2050 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 RNU6-304P-201ENST00000364855 107 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKNOX1P55347 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PKNOX1P55347 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
PKNOX1P55347 RPL23AP59-201ENST00000399415 461 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 AL133270.1-201ENST00000402635 279 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 RNU6-603P-201ENST00000411403 107 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.11□□□□□ -1.75
PKNOX1P55347 AL157831.1-201ENST00000426134 473 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.11□□□□□ -1.75
PKNOX1P55347 RPL12P46-201ENST00000436610 195 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 RPL23AP52-201ENST00000439311 478 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.11□□□□□ -1.75
PKNOX1P55347 PHBP16-201ENST00000446318 950 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.11□□□□□ -1.75
PKNOX1P55347 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.11□□□□□ -1.75
PKNOX1P55347 AC108471.1-201ENST00000513977 287 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.11□□□□□ -1.75
PKNOX1P55347 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.11□□□□□ -1.75
PKNOX1P55347 AC012414.2-201ENST00000559474 187 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.11□□□□□ -1.75
PKNOX1P55347 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PKNOX1P55347 AC078899.5-201ENST00000612475 178 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.11□□□□□ -1.75
PKNOX1P55347 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.11□□□□□ -1.75
PKNOX1P55347 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.11□□□□□ -1.75
PKNOX1P55347 AC008013.2-202ENST00000637965 364 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.11□□□□□ -1.75
PKNOX1P55347 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PKNOX1P55347 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 EIF2AP4-201ENST00000424793 1781 ntBASIC4.11□□□□□ -1.75
PKNOX1P55347 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PKNOX1P55347 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.11□□□□□ -1.75
PKNOX1P55347 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PKNOX1P55347 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PKNOX1P55347 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.1□□□□□ -1.75
PKNOX1P55347 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PKNOX1P55347 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PKNOX1P55347 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms