Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CDH13P55290 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH13P55290 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CDH13P55290 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH13P55290 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH13P55290 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH13P55290 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDH13P55290 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CDH13P55290 AL627171.1-201ENST00000618845 1308 ntBASIC4.53□□□□□ -1.68
CDH13P55290 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH13P55290 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
CDH13P55290 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH13P55290 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH13P55290 EOGT-210ENST00000615922 1931 ntBASIC4.53□□□□□ -1.68
CDH13P55290 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH13P55290 RNU5B-1-201ENST00000363286 116 ntBASIC4.53□□□□□ -1.68
CDH13P55290 RNU6-925P-201ENST00000384629 104 ntBASIC4.53□□□□□ -1.68
CDH13P55290 MIR525-201ENST00000384978 85 ntBASIC4.53□□□□□ -1.68
CDH13P55290 MIR921-201ENST00000401133 56 ntBASIC4.53□□□□□ -1.68
CDH13P55290 MTATP6P31-201ENST00000406985 692 ntBASIC4.53□□□□□ -1.68
CDH13P55290 SNORA11C-201ENST00000408532 129 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AC013410.2-201ENST00000422627 201 ntBASIC4.53□□□□□ -1.68
CDH13P55290 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.53□□□□□ -1.68
CDH13P55290 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH13P55290 RPL12P46-201ENST00000436610 195 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH13P55290 MTATP6P14-201ENST00000455189 673 ntBASIC4.53□□□□□ -1.68
CDH13P55290 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH13P55290 HMGB1P38-201ENST00000490557 577 ntBASIC4.53□□□□□ -1.68
CDH13P55290 RN7SL808P-201ENST00000496066 299 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AC025164.1-201ENST00000496249 478 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH13P55290 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH13P55290 IGLV2-28-201ENST00000520681 304 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH13P55290 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH13P55290 AC021006.3-201ENST00000530771 192 ntBASIC4.53□□□□□ -1.68
CDH13P55290 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH13P55290 AP001880.2-201ENST00000538233 448 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH13P55290 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH13P55290 GSTP1P1-201ENST00000548078 319 ntBASIC4.53□□□□□ -1.68
CDH13P55290 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH13P55290 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH13P55290 YWHAZP1-201ENST00000556286 722 ntBASIC4.53□□□□□ -1.68
CDH13P55290 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.53□□□□□ -1.68
CDH13P55290 ATP5J2P6-201ENST00000565203 266 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH13P55290 VN1R87P-201ENST00000596706 487 ntBASIC4.53□□□□□ -1.68
CDH13P55290 VN1R88P-201ENST00000596787 292 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH13P55290 BNIP3P39-201ENST00000601077 554 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH13P55290 AL158050.2-201ENST00000605336 568 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH13P55290 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH13P55290 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AC009318.3-201ENST00000616916 503 ntBASIC4.53□□□□□ -1.68
CDH13P55290 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH13P55290 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH13P55290 AC004232.3-201ENST00000622977 525 ntBASIC4.53□□□□□ -1.68
CDH13P55290 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH13P55290 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
CDH13P55290 INTS6P1-201ENST00000504674 2530 ntBASIC4.53□□□□□ -1.68
CDH13P55290 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH13P55290 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH13P55290 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH13P55290 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH13P55290 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CDH13P55290 AL592182.3-201ENST00000642132 3304 ntBASIC4.52□□□□□ -1.69
CDH13P55290 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH13P55290 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH13P55290 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH13P55290 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH13P55290 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH13P55290 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH13P55290 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH13P55290 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH13P55290 RNU1-94P-201ENST00000362627 173 ntBASIC4.52□□□□□ -1.69
CDH13P55290 RNA5SP507-201ENST00000363603 121 ntBASIC4.52□□□□□ -1.69
CDH13P55290 SNORA74A-201ENST00000364089 198 ntBASIC4.52□□□□□ -1.69
CDH13P55290 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 RNA5SP372-201ENST00000390836 115 ntBASIC4.52□□□□□ -1.69
CDH13P55290 AC096533.1-201ENST00000411645 353 ntBASIC4.52□□□□□ -1.69
CDH13P55290 RSU1P3-201ENST00000412878 835 ntBASIC4.52□□□□□ -1.69
CDH13P55290 RPL21P108-201ENST00000413857 481 ntBASIC4.52□□□□□ -1.69
CDH13P55290 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 AC004448.2-201ENST00000422360 586 ntBASIC4.52□□□□□ -1.69
CDH13P55290 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH13P55290 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH13P55290 EEF1A1P1-201ENST00000447052 739 ntBASIC4.52□□□□□ -1.69
CDH13P55290 DNAJC19P8-201ENST00000452887 259 ntBASIC4.52□□□□□ -1.69
CDH13P55290 CDC42P1-201ENST00000456658 548 ntBASIC4.52□□□□□ -1.69
CDH13P55290 AC074386.1-201ENST00000476560 767 ntBASIC4.52□□□□□ -1.69
CDH13P55290 RN7SL629P-201ENST00000489622 285 ntBASIC4.52□□□□□ -1.69
CDH13P55290 SCARNA22-201ENST00000503991 125 ntBASIC4.52□□□□□ -1.69
CDH13P55290 AC098799.3-201ENST00000506095 438 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms