Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC073335.1-201ENST00000427776 363 ntBASIC4.66□□□□□ -1.66
SSR1P43307 MTCO1P54-201ENST00000430139 712 ntBASIC4.66□□□□□ -1.66
SSR1P43307 AC006466.1-201ENST00000438721 289 ntBASIC4.66□□□□□ -1.66
SSR1P43307 YWHAZP2-201ENST00000440317 728 ntBASIC4.66□□□□□ -1.66
SSR1P43307 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.66□□□□□ -1.66
SSR1P43307 RPL31P53-201ENST00000457065 348 ntBASIC4.66□□□□□ -1.66
SSR1P43307 RNU7-170P-201ENST00000459303 61 ntBASIC4.66□□□□□ -1.66
SSR1P43307 RPL35AP28-201ENST00000459730 331 ntBASIC4.66□□□□□ -1.66
SSR1P43307 RPL7L1P8-201ENST00000469911 741 ntBASIC4.66□□□□□ -1.66
SSR1P43307 SNX5P1-201ENST00000505757 1041 ntBASIC4.66□□□□□ -1.66
SSR1P43307 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.66□□□□□ -1.66
SSR1P43307 AC147055.1-201ENST00000509261 750 ntBASIC4.66□□□□□ -1.66
SSR1P43307 PPBPP1-201ENST00000510807 373 ntBASIC4.66□□□□□ -1.66
SSR1P43307 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSR1P43307 AC090151.1-201ENST00000520784 730 ntBASIC4.66□□□□□ -1.66
SSR1P43307 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSR1P43307 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.66□□□□□ -1.66
SSR1P43307 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.66□□□□□ -1.66
SSR1P43307 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.66□□□□□ -1.66
SSR1P43307 BNIP3P32-201ENST00000600015 554 ntBASIC4.66□□□□□ -1.66
SSR1P43307 HMGB1P50-201ENST00000605814 607 ntBASIC4.66□□□□□ -1.66
SSR1P43307 AC100827.5-201ENST00000615883 426 ntBASIC4.66□□□□□ -1.66
SSR1P43307 AL049536.1-201ENST00000625043 744 ntBASIC4.66□□□□□ -1.66
SSR1P43307 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSR1P43307 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.65□□□□□ -1.66
SSR1P43307 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.65□□□□□ -1.66
SSR1P43307 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.65□□□□□ -1.66
SSR1P43307 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSR1P43307 AC010132.2-201ENST00000295493 1043 ntBASIC4.65□□□□□ -1.67
SSR1P43307 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SSR1P43307 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSR1P43307 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSR1P43307 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.65□□□□□ -1.67
SSR1P43307 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SSR1P43307 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.65□□□□□ -1.67
SSR1P43307 GLULP6-201ENST00000399502 913 ntBASIC4.65□□□□□ -1.67
SSR1P43307 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SSR1P43307 AC048351.1-201ENST00000420064 602 ntBASIC4.65□□□□□ -1.67
SSR1P43307 AC007394.1-201ENST00000421941 531 ntBASIC4.65□□□□□ -1.67
SSR1P43307 UBE2V1P3-201ENST00000439651 417 ntBASIC4.65□□□□□ -1.67
SSR1P43307 RPL36AP15-201ENST00000444514 266 ntBASIC4.65□□□□□ -1.67
SSR1P43307 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.65□□□□□ -1.67
SSR1P43307 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.65□□□□□ -1.67
SSR1P43307 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.65□□□□□ -1.67
SSR1P43307 OR7L1P-201ENST00000456181 380 ntBASIC4.65□□□□□ -1.67
SSR1P43307 AL136097.1-201ENST00000456945 913 ntBASIC4.65□□□□□ -1.67
SSR1P43307 PSMC1P13-201ENST00000458195 985 ntBASIC4.65□□□□□ -1.67
SSR1P43307 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.65□□□□□ -1.67
SSR1P43307 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.65□□□□□ -1.67
SSR1P43307 RPL23AP71-201ENST00000470966 469 ntBASIC4.65□□□□□ -1.67
SSR1P43307 IGLV2-34-201ENST00000490007 283 ntBASIC4.65□□□□□ -1.67
SSR1P43307 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.65□□□□□ -1.67
SSR1P43307 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.65□□□□□ -1.67
SSR1P43307 AC108471.1-201ENST00000513977 287 ntBASIC4.65□□□□□ -1.67
SSR1P43307 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.65□□□□□ -1.67
SSR1P43307 IGKV2-23-201ENST00000518729 323 ntBASIC4.65□□□□□ -1.67
SSR1P43307 IGLV3-26-201ENST00000520756 302 ntBASIC4.65□□□□□ -1.67
SSR1P43307 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSR1P43307 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.65□□□□□ -1.67
SSR1P43307 AC051619.2-201ENST00000559063 397 ntBASIC4.65□□□□□ -1.67
SSR1P43307 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.65□□□□□ -1.67
SSR1P43307 AC141257.3-201ENST00000572906 215 ntBASIC4.65□□□□□ -1.67
SSR1P43307 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.65□□□□□ -1.67
SSR1P43307 AC010201.1-201ENST00000605051 540 ntBASIC4.65□□□□□ -1.67
SSR1P43307 AP001784.1-201ENST00000624107 428 ntBASIC4.65□□□□□ -1.67
SSR1P43307 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.65□□□□□ -1.67
SSR1P43307 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
SSR1P43307 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SSR1P43307 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSR1P43307 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSR1P43307 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSR1P43307 RNA5SP397-201ENST00000391323 118 ntBASIC4.64□□□□□ -1.67
SSR1P43307 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSR1P43307 RPL30P3-201ENST00000424262 333 ntBASIC4.64□□□□□ -1.67
SSR1P43307 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.64□□□□□ -1.67
SSR1P43307 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.64□□□□□ -1.67
SSR1P43307 AL772161.1-201ENST00000439130 476 ntBASIC4.64□□□□□ -1.67
SSR1P43307 RPL7P33-201ENST00000444159 742 ntBASIC4.64□□□□□ -1.67
SSR1P43307 AL162591.2-201ENST00000449634 317 ntBASIC4.64□□□□□ -1.67
SSR1P43307 SNORD108-201ENST00000459332 71 ntBASIC4.64□□□□□ -1.67
SSR1P43307 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.64□□□□□ -1.67
SSR1P43307 AC010374.1-201ENST00000503762 1237 ntBASIC4.64□□□□□ -1.67
SSR1P43307 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSR1P43307 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSR1P43307 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.64□□□□□ -1.67
SSR1P43307 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.64□□□□□ -1.67
SSR1P43307 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.64□□□□□ -1.67
SSR1P43307 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.64□□□□□ -1.67
SSR1P43307 AC115621.1-201ENST00000604653 858 ntBASIC4.64□□□□□ -1.67
SSR1P43307 AL034351.1-201ENST00000605288 668 ntBASIC4.64□□□□□ -1.67
SSR1P43307 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.64□□□□□ -1.67
SSR1P43307 AL161616.1-201ENST00000611867 286 ntBASIC4.64□□□□□ -1.67
SSR1P43307 RMST_5.1-201ENST00000618704 126 ntBASIC4.64□□□□□ -1.67
SSR1P43307 AP005019.3-201ENST00000620418 560 ntBASIC4.64□□□□□ -1.67
SSR1P43307 AC020978.9-201ENST00000624380 1141 ntBASIC4.64□□□□□ -1.67
SSR1P43307 FAM35DP-201ENST00000323387 2712 ntBASIC4.64□□□□□ -1.67
SSR1P43307 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSR1P43307 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSR1P43307 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSR1P43307 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms