Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 AL117339.2-201ENST00000430475 180 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 GSTA7P-201ENST00000438425 448 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 HMGB1P37-201ENST00000439613 609 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 RANP8-201ENST00000444720 713 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 AL162151.2-201ENST00000448875 158 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 NUTF2P7-201ENST00000453086 375 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 RPS4XP15-201ENST00000489210 795 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 AC110792.1-201ENST00000491826 472 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 AC108064.1-201ENST00000513791 460 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 SNX6P1-201ENST00000601728 1224 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 ZYXP1-201ENST00000617638 118 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 MIR6500-201ENST00000622700 86 ntBASIC4.01□□□□□ -1.77
HLA-DQB2P05538 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DQB2P05538 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQB2P05538 AC004552.1-201ENST00000419089 348 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AC092647.1-201ENST00000420654 287 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AC004975.1-201ENST00000428733 208 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 NANOGP6-201ENST00000429190 847 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AC087650.1-201ENST00000431445 468 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 KCTD9P3-201ENST00000434597 1169 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DQB2P05538 RPS17P13-201ENST00000448974 407 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQB2P05538 RPS26P3-201ENST00000470205 348 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AC098583.1-201ENST00000480875 255 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AC090543.2-201ENST00000483963 348 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AC004057.1-201ENST00000485827 348 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4□□□□□ -1.77
HLA-DQB2P05538 NDUFA5P2-201ENST00000519723 344 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQB2P05538 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4□□□□□ -1.77
HLA-DQB2P05538 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQB2P05538 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
HLA-DQB2P05538 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4□□□□□ -1.77
HLA-DQB2P05538 AC073530.2-201ENST00000623987 261 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 RNA5SP196-201ENST00000625967 102 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DQB2P05538 AC093775.1-201ENST00000624154 1868 ntBASIC4□□□□□ -1.77
HLA-DQB2P05538 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DQB2P05538 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DQB2P05538 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DQB2P05538 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQB2P05538 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DQB2P05538 AP002001.2-201ENST00000529025 1469 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 RNA5SP283-201ENST00000365604 119 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 RNA5SP39-201ENST00000411245 120 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 AC091390.1-201ENST00000433904 331 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 AC096638.2-201ENST00000434965 711 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 MTND6P18-201ENST00000439477 513 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 HSFY6P-201ENST00000445573 403 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 PPIAP15-201ENST00000479662 484 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 AC026726.1-201ENST00000512859 601 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 MIR4697-201ENST00000582977 78 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms