Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC083923.1-201ENST00000523708 376 ntBASIC4.37□□□□□ -1.71
SNX3O60493 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX3O60493 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX3O60493 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX3O60493 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX3O60493 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX3O60493 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX3O60493 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX3O60493 AC023825.1-201ENST00000566704 1030 ntBASIC4.37□□□□□ -1.71
SNX3O60493 RN7SL652P-201ENST00000577769 300 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX3O60493 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX3O60493 FKBP1AP1-201ENST00000594588 318 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.37□□□□□ -1.71
SNX3O60493 AL589674.2-201ENST00000604304 337 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AF129408.1-201ENST00000608767 431 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AC093799.2-201ENST00000610062 578 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AC007275.1-201ENST00000621243 671 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AP003476.1-201ENST00000623984 516 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX3O60493 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.37□□□□□ -1.71
SNX3O60493 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX3O60493 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX3O60493 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX3O60493 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SNX3O60493 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX3O60493 AC010329.2-201ENST00000595195 2737 ntBASIC4.36□□□□□ -1.71
SNX3O60493 ENSAP3-201ENST00000312710 333 ntBASIC4.36□□□□□ -1.71
SNX3O60493 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX3O60493 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SNX3O60493 RNU6-1257P-201ENST00000384625 110 ntBASIC4.36□□□□□ -1.71
SNX3O60493 RPL23AP59-201ENST00000399415 461 ntBASIC4.36□□□□□ -1.71
SNX3O60493 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX3O60493 U3.36-201ENST00000408418 213 ntBASIC4.36□□□□□ -1.71
SNX3O60493 RPL6P29-201ENST00000414863 865 ntBASIC4.36□□□□□ -1.71
SNX3O60493 GJA6P-201ENST00000415117 1042 ntBASIC4.36□□□□□ -1.71
SNX3O60493 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX3O60493 AC234779.1-201ENST00000425910 285 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX3O60493 TPTE2P6-202ENST00000445572 1007 ntBASIC4.36□□□□□ -1.71
SNX3O60493 PTMAP3-201ENST00000447474 330 ntBASIC4.36□□□□□ -1.71
SNX3O60493 RPL31P15-201ENST00000449770 338 ntBASIC4.36□□□□□ -1.71
SNX3O60493 GTF2IP12-201ENST00000456547 356 ntBASIC4.36□□□□□ -1.71
SNX3O60493 FCF1P6-201ENST00000456841 595 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX3O60493 AC006517.1-201ENST00000480485 328 ntBASIC4.36□□□□□ -1.71
SNX3O60493 RPL7P39-201ENST00000481157 744 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AC140172.1-201ENST00000502928 141 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX3O60493 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX3O60493 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX3O60493 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX3O60493 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.36□□□□□ -1.71
SNX3O60493 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX3O60493 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.36□□□□□ -1.71
SNX3O60493 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.36□□□□□ -1.71
SNX3O60493 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX3O60493 OR11J2P-201ENST00000555298 907 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.36□□□□□ -1.71
SNX3O60493 AC016180.1-201ENST00000567945 403 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AC008507.2-201ENST00000588402 1176 ntBASIC4.36□□□□□ -1.71
SNX3O60493 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX3O60493 AC125494.3-201ENST00000602759 455 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AP000864.1-201ENST00000609424 650 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AC243654.2-201ENST00000612843 443 ntBASIC4.36□□□□□ -1.71
SNX3O60493 STMN1P1-201ENST00000617809 440 ntBASIC4.36□□□□□ -1.71
SNX3O60493 MIR6778-201ENST00000617912 73 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AC127024.6-201ENST00000621598 424 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AC009269.6-201ENST00000621778 588 ntBASIC4.36□□□□□ -1.71
SNX3O60493 OR8A1-204ENST00000642111 1145 ntBASIC4.36□□□□□ -1.71
SNX3O60493 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX3O60493 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.36□□□□□ -1.71
SNX3O60493 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX3O60493 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX3O60493 AP000756.2-201ENST00000624168 2567 ntBASIC4.36□□□□□ -1.71
SNX3O60493 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX3O60493 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SNX3O60493 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX3O60493 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX3O60493 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX3O60493 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX3O60493 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX3O60493 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX3O60493 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SNX3O60493 RNU6-1000P-201ENST00000391066 106 ntBASIC4.35□□□□□ -1.71
SNX3O60493 AL035419.1-201ENST00000397037 564 ntBASIC4.35□□□□□ -1.71
SNX3O60493 Z98745.1-201ENST00000402553 494 ntBASIC4.35□□□□□ -1.71
SNX3O60493 AL590290.1-201ENST00000405336 380 ntBASIC4.35□□□□□ -1.71
SNX3O60493 NCSTNP1-201ENST00000406229 144 ntBASIC4.35□□□□□ -1.71
SNX3O60493 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.35□□□□□ -1.71
SNX3O60493 RN7SKP267-201ENST00000410381 285 ntBASIC4.35□□□□□ -1.71
SNX3O60493 TRGV6-201ENST00000417928 299 ntBASIC4.35□□□□□ -1.71
SNX3O60493 AC140479.3-201ENST00000418944 1126 ntBASIC4.35□□□□□ -1.71
SNX3O60493 OR2B7P-201ENST00000429302 934 ntBASIC4.35□□□□□ -1.71
SNX3O60493 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SNX3O60493 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX3O60493 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX3O60493 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX3O60493 AC068135.1-201ENST00000446164 246 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms