Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RN7SL629P-201ENST00000489622 285 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 RPS23P1-201ENST00000491662 432 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AC020593.1-201ENST00000507399 299 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.17□□□□□ -1.9
SSSCA1O60232 snoU109.6-201ENST00000516831 118 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.17□□□□□ -1.9
SSSCA1O60232 AC010476.1-201ENST00000519111 851 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.17□□□□□ -1.9
SSSCA1O60232 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.17□□□□□ -1.9
SSSCA1O60232 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.17□□□□□ -1.9
SSSCA1O60232 OR8G5-201ENST00000524943 1041 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.17□□□□□ -1.9
SSSCA1O60232 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.17□□□□□ -1.9
SSSCA1O60232 AC091515.1-201ENST00000548110 679 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AL121576.1-201ENST00000556055 276 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AC090877.1-201ENST00000561418 344 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.17□□□□□ -1.9
SSSCA1O60232 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.17□□□□□ -1.9
SSSCA1O60232 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSSCA1O60232 OR6R2P-201ENST00000609216 300 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.17□□□□□ -1.9
SSSCA1O60232 ATE1-AS1-202ENST00000636460 506 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.17□□□□□ -1.9
SSSCA1O60232 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.17□□□□□ -1.9
SSSCA1O60232 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.17□□□□□ -1.9
SSSCA1O60232 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSSCA1O60232 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SSSCA1O60232 AC007529.1-201ENST00000418574 2178 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SSSCA1O60232 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSSCA1O60232 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SSSCA1O60232 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.16□□□□□ -1.9
SSSCA1O60232 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSSCA1O60232 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSSCA1O60232 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSSCA1O60232 RNA5SP239-201ENST00000410218 129 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 HSPE1P12-201ENST00000412576 301 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.16□□□□□ -1.9
SSSCA1O60232 RPS26P13-201ENST00000419030 330 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 AC093698.1-201ENST00000423843 571 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.16□□□□□ -1.9
SSSCA1O60232 MTCO1P51-201ENST00000427672 1060 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 AC083863.1-201ENST00000438811 231 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 AC099063.2-201ENST00000446360 662 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 EIF4A1P11-201ENST00000451239 222 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 AP000926.1-201ENST00000479573 241 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 RN7SL604P-201ENST00000492589 296 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 AGGF1P3-201ENST00000493675 1213 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.16□□□□□ -1.9
SSSCA1O60232 RN7SKP209-201ENST00000516888 304 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.16□□□□□ -1.9
SSSCA1O60232 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.16□□□□□ -1.9
SSSCA1O60232 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.16□□□□□ -1.9
SSSCA1O60232 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.16□□□□□ -1.9
SSSCA1O60232 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.16□□□□□ -1.9
SSSCA1O60232 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.16□□□□□ -1.9
SSSCA1O60232 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.16□□□□□ -1.9
SSSCA1O60232 AC093765.1-201ENST00000603758 881 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 AC016769.4-201ENST00000616893 535 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 AC132825.8-201ENST00000640783 297 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 AL133412.1-201ENST00000380194 2992 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSSCA1O60232 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.16□□□□□ -1.9
SSSCA1O60232 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSSCA1O60232 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SSSCA1O60232 AC008725.1-201ENST00000605123 2263 ntBASIC3.16□□□□□ -1.9
SSSCA1O60232 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
SSSCA1O60232 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
SSSCA1O60232 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SSSCA1O60232 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.15□□□□□ -1.9
SSSCA1O60232 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SSSCA1O60232 RNA5SP399-201ENST00000364003 117 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.15□□□□□ -1.91
SSSCA1O60232 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SSSCA1O60232 MIR129-1-201ENST00000384972 72 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.15□□□□□ -1.91
SSSCA1O60232 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.15□□□□□ -1.91
SSSCA1O60232 RPL30P2-201ENST00000414021 291 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.15□□□□□ -1.91
SSSCA1O60232 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.15□□□□□ -1.91
SSSCA1O60232 AC069213.2-201ENST00000420238 366 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 RPL7P53-201ENST00000421245 739 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 OR5AW1P-201ENST00000426334 1006 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 AL158073.1-201ENST00000426848 1104 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 AL360081.1-201ENST00000428299 555 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.15□□□□□ -1.91
SSSCA1O60232 AC243772.1-201ENST00000451620 410 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 AC005229.2-201ENST00000456995 399 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 EIF2S2P4-201ENST00000461070 984 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 AC099522.1-202ENST00000514718 367 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 IGKV2D-23-201ENST00000518179 286 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 SUMO2P20-201ENST00000520803 283 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.15□□□□□ -1.91
SSSCA1O60232 MIR4436B2-201ENST00000581415 91 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 MIR4436B1-201ENST00000583272 91 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.15□□□□□ -1.91
SSSCA1O60232 VN1R79P-201ENST00000593540 513 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.15□□□□□ -1.91
SSSCA1O60232 AC068790.7-201ENST00000602347 528 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms