Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRTM2O43300 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRTM2O43300 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LRRTM2O43300 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 RNA5SP515-201ENST00000364570 118 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 SNORD51.1-201ENST00000365405 77 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 MIR23B-201ENST00000384832 97 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.3□□□□□ -1.72
LRRTM2O43300 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRTM2O43300 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRTM2O43300 RNF19BPX-201ENST00000426224 625 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 NDUFA5P10-201ENST00000432147 357 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AL606490.7-201ENST00000433136 191 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRTM2O43300 EEF1A1P1-201ENST00000447052 739 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AP002345.1-201ENST00000456493 928 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AC011276.1-201ENST00000469688 323 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AC104971.1-201ENST00000495117 578 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRTM2O43300 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRTM2O43300 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRTM2O43300 BUD31P1-201ENST00000521828 359 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.3□□□□□ -1.72
LRRTM2O43300 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRTM2O43300 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRTM2O43300 AC084824.1-201ENST00000550917 1005 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRTM2O43300 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRTM2O43300 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.3□□□□□ -1.72
LRRTM2O43300 AC007224.1-201ENST00000564410 144 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AC093249.4-201ENST00000564755 259 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRTM2O43300 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRTM2O43300 AC069061.3-201ENST00000582254 823 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 HMGB2P1-201ENST00000591146 634 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 BNIP3P22-201ENST00000593399 556 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 OR4H6P-202ENST00000603819 340 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRTM2O43300 AC026979.4-201ENST00000606555 645 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 AC243654.2-201ENST00000612843 443 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AL392048.1-201ENST00000613946 534 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AL035461.2-201ENST00000619201 524 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AC011944.2-201ENST00000624440 683 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 AC116563.2-201ENST00000624751 535 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRTM2O43300 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 AC007390.2-201ENST00000606229 3803 ntBASIC4.3□□□□□ -1.72
LRRTM2O43300 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRTM2O43300 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
LRRTM2O43300 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRTM2O43300 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRTM2O43300 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.29□□□□□ -1.72
LRRTM2O43300 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.29□□□□□ -1.72
LRRTM2O43300 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.29□□□□□ -1.72
LRRTM2O43300 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LRRTM2O43300 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LRRTM2O43300 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LRRTM2O43300 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRRTM2O43300 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRRTM2O43300 Y_RNA.110-201ENST00000363220 99 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 MIR195-201ENST00000385194 87 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 RNA5SP397-201ENST00000391323 118 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 ARL4AP5-201ENST00000404372 599 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 ATG4AP1-201ENST00000416893 538 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 AC004448.2-201ENST00000422360 586 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRTM2O43300 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.29□□□□□ -1.72
LRRTM2O43300 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRTM2O43300 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.29□□□□□ -1.72
LRRTM2O43300 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRTM2O43300 CBX1P1-201ENST00000440184 427 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 MTND2P25-201ENST00000449028 610 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRTM2O43300 AC006511.1-201ENST00000470614 315 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRTM2O43300 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.29□□□□□ -1.72
LRRTM2O43300 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.29□□□□□ -1.72
LRRTM2O43300 FKBP1BP1-201ENST00000553366 325 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRTM2O43300 CR589904.2-201ENST00000612533 440 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.29□□□□□ -1.72
LRRTM2O43300 AL512506.1-201ENST00000613918 449 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 AC025016.1-201ENST00000616746 682 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 AL158196.1-201ENST00000616786 434 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.29□□□□□ -1.72
LRRTM2O43300 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LRRTM2O43300 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.29□□□□□ -1.72
LRRTM2O43300 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRRTM2O43300 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
LRRTM2O43300 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRRTM2O43300 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRRTM2O43300 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms