Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MIR2114-201ENST00000516645 80 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 RNA5SP143-201ENST00000516936 115 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 MTND1P6-201ENST00000523621 946 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK1AO00322 AC115989.2-201ENST00000578640 563 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 MIR4284-201ENST00000578924 81 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 AC090312.1-201ENST00000580637 348 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 AL137246.1-201ENST00000607072 977 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.87□□□□□ -1.79
UPK1AO00322 AP005264.7-201ENST00000625003 745 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK1AO00322 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPK1AO00322 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.87□□□□□ -1.79
UPK1AO00322 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK1AO00322 LARP1BP1-201ENST00000506036 1359 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UPK1AO00322 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.86□□□□□ -1.79
UPK1AO00322 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.86□□□□□ -1.79
UPK1AO00322 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.86□□□□□ -1.79
UPK1AO00322 MIR383-201ENST00000362257 73 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 RNA5SP105-201ENST00000391123 113 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK1AO00322 AC006011.1-201ENST00000442758 349 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK1AO00322 AL162388.1-201ENST00000450912 352 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 OR6C72P-201ENST00000451403 892 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 RPL36AP13-201ENST00000457490 317 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK1AO00322 UQCRHP4-201ENST00000471686 272 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 AC106806.2-201ENST00000509365 500 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK1AO00322 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 NDUFB4P12-201ENST00000513465 390 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 RAB9BP1-201ENST00000519581 626 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 IGLVIV-53-201ENST00000520107 367 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK1AO00322 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.86□□□□□ -1.79
UPK1AO00322 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK1AO00322 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.86□□□□□ -1.79
UPK1AO00322 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK1AO00322 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.86□□□□□ -1.79
UPK1AO00322 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK1AO00322 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK1AO00322 MIR3138-201ENST00000585238 82 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 ELOCP28-201ENST00000590044 317 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 IPO5P1-202ENST00000600039 287 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.86□□□□□ -1.79
UPK1AO00322 BX323046.1-201ENST00000610145 535 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 AC010435.1-201ENST00000623353 1177 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.86□□□□□ -1.79
UPK1AO00322 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
UPK1AO00322 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 HSPA8P17-201ENST00000427029 1382 ntBASIC3.86□□□□□ -1.79
UPK1AO00322 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1AO00322 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1AO00322 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1AO00322 AC116667.1-201ENST00000604855 2072 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
UPK1AO00322 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1AO00322 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1AO00322 RNA5SP502-201ENST00000362694 119 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1AO00322 PGBD4P8-201ENST00000412993 562 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1AO00322 CHIAP3-201ENST00000423668 1133 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1AO00322 IFNNP1-201ENST00000429219 553 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 AC087650.1-201ENST00000431445 468 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1AO00322 AL133244.1-201ENST00000456007 258 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 RPL7AP52-201ENST00000458096 790 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 RN7SL481P-201ENST00000477764 299 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 AC105137.1-201ENST00000484355 562 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
UPK1AO00322 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1AO00322 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1AO00322 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1AO00322 OR7E10P-201ENST00000526420 991 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1AO00322 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1AO00322 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1AO00322 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1AO00322 CD24P2-201ENST00000565486 219 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.85□□□□□ -1.79
UPK1AO00322 RPL23AP87-202ENST00000573039 466 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 AC015911.5-201ENST00000587076 451 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1AO00322 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1AO00322 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1AO00322 AC104662.1-201ENST00000604448 511 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms