Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 OR52B1P-201ENST00000316506 909 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 SNORA40.4-201ENST00000390971 128 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AL022722.2-201ENST00000402519 180 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AL353692.2-201ENST00000407054 335 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 MORF4L1P7-201ENST00000426038 703 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 RPL23AP4-201ENST00000427757 463 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 VDAC1P6-201ENST00000430062 855 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 CDY14P-201ENST00000431260 1014 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 RPL17P35-201ENST00000432217 549 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AL132765.1-201ENST00000434165 553 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AC074367.1-201ENST00000438685 1125 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 CDY12P-201ENST00000440679 1015 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AL512326.1-201ENST00000443050 721 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 CDY13P-201ENST00000445813 1015 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 CDY23P-201ENST00000451661 1014 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 RPS7P7-201ENST00000463499 571 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 CABYRP1-201ENST00000465493 1045 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AC020898.1-201ENST00000474167 787 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 SUMO1P1-201ENST00000497904 306 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 DYNLL1P4-201ENST00000549314 266 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 NOP56P3-201ENST00000549457 385 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AC084824.1-201ENST00000550917 1005 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 RPL21P136-201ENST00000605378 396 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 MIR8059-201ENST00000620427 81 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AL445363.3-201ENST00000623080 671 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 AL133268.1-201ENST00000405676 1401 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 SPATA2P1-201ENST00000431223 2055 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 DDX18P4-201ENST00000511690 1966 ntBASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP307-201ENST00000362863 116 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 RNU6-31P-201ENST00000384388 108 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 SNORA57.1-201ENST00000391227 145 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 RPS27AP11-201ENST00000402798 447 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP317-201ENST00000410176 116 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP311-201ENST00000411290 116 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 RPL26P37-201ENST00000411983 438 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 CYCSP10-201ENST00000417973 294 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 MTND2P11-201ENST00000423638 648 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AL157831.1-201ENST00000426134 473 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 OR4C10P-201ENST00000434991 931 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AL049829.1-201ENST00000465411 156 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC025768.1-201ENST00000510057 267 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 TCP11X3P-202ENST00000514289 1254 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP315-201ENST00000516340 116 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP312-201ENST00000517068 116 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 IGHV3-63-201ENST00000518422 341 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC027176.2-201ENST00000559166 746 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC004775.1-201ENST00000607389 753 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AP006248.3-201ENST00000623580 594 ntBASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 AC090506.2-201ENST00000624521 419 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms