Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC068831.4-201ENST00000556118 109 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 TVP23BP1-201ENST00000557500 617 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC067805.1-201ENST00000559344 470 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 MIR3908-201ENST00000579798 126 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC020915.5-201ENST00000596836 964 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC020914.4-201ENST00000597690 277 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AL161729.3-201ENST00000603533 673 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 MIR486-1-201ENST00000612171 68 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AP002967.1-201ENST00000624203 539 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 IPO8P1-201ENST00000455509 3109 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC083899.2-201ENST00000423285 1376 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 HSPA8P17-201ENST00000427029 1382 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RNU4-23P-201ENST00000362839 140 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 SNORA56-201ENST00000383966 129 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RNU6-891P-201ENST00000384280 111 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RPS3AP23-201ENST00000401762 784 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RPS16P5-201ENST00000406501 404 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RN7SKP56-201ENST00000410513 331 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RN7SKP182-201ENST00000410772 298 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 CHIAP3-201ENST00000423668 1133 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RPS29P17-201ENST00000430795 166 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 ATP5HP2-201ENST00000433885 485 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 OR6C72P-201ENST00000451403 892 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC133473.1-201ENST00000455173 299 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RPL23AP24-201ENST00000458203 385 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RNA5SP246-201ENST00000458909 119 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RN7SL809P-201ENST00000482040 297 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC026726.1-201ENST00000512859 601 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 RNA5SP143-201ENST00000516936 115 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC087272.1-201ENST00000523624 533 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 CR383656.6-201ENST00000550518 394 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 MIR4330-201ENST00000579077 105 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC006213.5-201ENST00000619673 288 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AL118508.4-201ENST00000624142 1176 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 MFSD8-216ENST00000641147 4009 ntBASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM49D1C9J1S8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 RNU1-132P-201ENST00000364300 164 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 RNA5SP505-201ENST00000364748 108 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 MIR192-201ENST00000384915 110 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 RPL12P28-201ENST00000430852 489 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 KCTD9P3-201ENST00000434597 1169 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 AL138787.1-202ENST00000437804 898 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 AL138878.2-201ENST00000440581 1241 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 CEACAMP9-201ENST00000442990 513 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 RPS20P4-201ENST00000461659 355 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms