Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-152P-201ENST00000384037 107 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AC025750.1-201ENST00000399891 379 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 OR13Z1P-201ENST00000416141 834 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AL691449.1-201ENST00000426570 421 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 TBCAP1-201ENST00000436520 327 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 GEMIN8P3-201ENST00000445417 720 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 RPL23AP2-201ENST00000471227 466 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 VN1R105P-201ENST00000486595 910 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 SEC11B-201ENST00000518383 499 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 MTND1P6-201ENST00000523621 946 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AC084759.1-201ENST00000561168 290 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 RN7SL703P-201ENST00000578485 302 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 BX322635.1-201ENST00000605804 496 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 MIR432-201ENST00000606207 94 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AL592494.3-201ENST00000609485 464 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 CDRT1-208ENST00000630868 794 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 Z82217.1-201ENST00000625157 8149 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 FAM91A3P-201ENST00000456826 2544 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 OR13C3-201ENST00000374781 1108 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 VDAC2P1-201ENST00000399358 958 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AL445189.1-201ENST00000405722 338 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 RN7SKP199-201ENST00000410325 305 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 PGBD4P8-201ENST00000412993 562 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 OR51A6P-201ENST00000418680 1004 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 CDC27P1-201ENST00000445384 715 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 RPS11P1-201ENST00000451072 473 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 TCP11X3P-202ENST00000514289 1254 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AL606490.9-201ENST00000603331 271 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AC022387.2-201ENST00000604050 448 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AL121890.2-201ENST00000617644 465 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AP001005.3-201ENST00000622049 129 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AL161637.1-201ENST00000622380 412 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 MIR6500-201ENST00000622700 86 ntBASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SMIM28A0A1B0GU29 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 SNORD35B-201ENST00000363660 87 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 MIR134-201ENST00000385258 73 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 RPL36AP36-201ENST00000418616 301 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 AJ239321.1-201ENST00000424255 564 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 AL359073.1-201ENST00000448036 403 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 RAB28P3-201ENST00000448325 597 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 RPS4XP15-201ENST00000489210 795 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 AC110792.1-201ENST00000491826 472 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms