Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TUSC7.1-201ENST00000610969 165 ntBASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 AL161616.1-201ENST00000611867 286 ntBASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 RNU6-368P-201ENST00000620928 107 ntBASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 RNU6-538P-201ENST00000622329 107 ntBASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 AC139792.2-201ENST00000624218 587 ntBASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 MIR3974-201ENST00000637126 96 ntBASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX2IPQ9Y2D8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC083843.3-201ENST00000623679 2186 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 VN2R3P-201ENST00000422626 1412 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 MIR589-201ENST00000385238 99 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 SKINT1L-201ENST00000401057 817 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AP000357.1-201ENST00000409926 1165 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 RNU2-50P-201ENST00000410494 143 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 RPL26P29-201ENST00000415623 438 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 RPL34P6-201ENST00000432390 345 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 NANOGP2-201ENST00000435391 727 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC092170.1-201ENST00000440211 356 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 RPL34P20-201ENST00000442771 351 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 RN7SL738P-201ENST00000470264 297 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 RPL23AP44-201ENST00000482216 473 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC097173.1-201ENST00000505862 819 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 OR5AK3P-201ENST00000527486 1297 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC023813.2-201ENST00000564321 469 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 MTCYBP13-201ENST00000578634 1093 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 RN7SL290P-201ENST00000578661 300 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC091057.2-201ENST00000602594 792 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AL137072.1-201ENST00000603444 466 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC004943.3-201ENST00000624116 600 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC011815.3-201ENST00000624194 473 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 LINC01808-202ENST00000641680 1116 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 LINC02211-204ENST00000642024 1070 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC073055.1-201ENST00000456901 1621 ntBASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SSX2IPQ9Y2D8 AC003973.3-201ENST00000624863 2822 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 IRF5P1-201ENST00000504852 2164 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC104454.1-201ENST00000421341 1401 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 RNU6-549P-201ENST00000384433 107 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC013442.1-201ENST00000397347 228 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC009518.2-201ENST00000418056 731 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 RSL24D1P3-201ENST00000449255 495 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 PRPF38AP1-201ENST00000451976 933 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 MRPL35P4-201ENST00000453682 566 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 RN7SL346P-201ENST00000491561 294 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 IGBP1P4-201ENST00000503202 879 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 BTF3P13-201ENST00000513224 490 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 RNA5SP43-201ENST00000516559 110 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 MTCO1P47-201ENST00000523889 1271 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC109635.6-201ENST00000525487 1113 ntBASIC5.42□□□□□ -1.54
SSX2IPQ9Y2D8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms