Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 VTA1P2-201ENST00000520205 911 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC090281.1-201ENST00000523019 276 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 CR383656.6-201ENST00000550518 394 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 GNRHR2P1-201ENST00000555315 631 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC025627.2-201ENST00000576220 160 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC007448.1-201ENST00000582714 234 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 MIR5684-201ENST00000585074 65 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC008745.1-201ENST00000604064 271 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AP000255.1-201ENST00000610276 676 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 MIR8059-201ENST00000620427 81 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC015722.2-201ENST00000622210 551 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AL451142.2-201ENST00000429076 2090 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 LARP1BP1-201ENST00000506036 1359 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 LINC02471-203ENST00000641941 4752 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AP000756.2-201ENST00000624168 2567 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC068254.2-201ENST00000623938 3577 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 MIR1251-201ENST00000408552 70 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AL590806.1-201ENST00000415818 853 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC092647.1-201ENST00000420654 287 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 RPL23AP38-201ENST00000423801 469 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 RPL12P46-201ENST00000436610 195 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 VN1R25P-201ENST00000443385 738 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 FCF1P7-201ENST00000451185 558 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 VN1R40P-201ENST00000455196 941 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AP002371.1-201ENST00000463604 433 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 RN7SL604P-201ENST00000492589 296 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 HPRT1P2-201ENST00000505250 544 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC022968.1-201ENST00000567372 442 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC018552.3-201ENST00000567416 561 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 ELOCP28-201ENST00000590044 317 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC006116.5-201ENST00000591936 559 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 MIR7151-201ENST00000617477 60 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC074276.2-201ENST00000619891 348 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 MIR4727-201ENST00000622232 55 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AL356489.2-201ENST00000566968 3528 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 AC005261.4-201ENST00000600047 1385 ntBASIC3.89□□□□□ -1.79
VPS29Q9UBQ0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 RNA5SP502-201ENST00000362694 119 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 GCNT6-201ENST00000379591 934 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 MIR937-201ENST00000401271 86 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 AC011742.1-201ENST00000431448 434 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 AC105137.1-201ENST00000484355 562 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 RPS26P15-201ENST00000488067 348 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 RPS23P1-201ENST00000491662 432 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 RPS27AP13-201ENST00000498403 237 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 FAM106CP-201ENST00000582212 507 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 MIR6820-201ENST00000611508 62 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms