Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 OR5BR1P-201ENST00000524992 1330 ntBASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 AC104964.3-201ENST00000606115 2860 ntBASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 GNL2P1-201ENST00000451274 2190 ntBASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 AP000756.2-201ENST00000624168 2567 ntBASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCM2LQ9NUG4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC008627.1-201ENST00000517511 1704 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 RNU1-134P-201ENST00000362935 165 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 Y_RNA.194-201ENST00000363985 102 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC005042.1-201ENST00000393397 800 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 RPL23AP29-201ENST00000397284 453 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AL390774.1-201ENST00000411924 246 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC099336.2-201ENST00000422457 254 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 B3GNT2P1-201ENST00000434960 952 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC064862.4-201ENST00000442180 334 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AP006222.1-205ENST00000450734 457 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC002553.3-201ENST00000453002 341 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 USP9YP10-201ENST00000454868 628 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 RPL18AP17-201ENST00000455326 198 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 NDUFA12P1-201ENST00000455914 406 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC099560.2-201ENST00000457554 255 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC109486.1-201ENST00000486833 374 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 LTV1P1-201ENST00000510683 1237 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 USP9YP5-201ENST00000511770 630 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 SOD1P3-201ENST00000518682 454 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC119751.7-201ENST00000600494 245 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC004987.4-201ENST00000603383 338 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC083899.3-201ENST00000603413 594 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC069304.2-201ENST00000605154 435 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC092354.1-201ENST00000606057 376 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 MIR7844-201ENST00000616161 122 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC135068.5-201ENST00000624197 983 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 ZNF37BP-203ENST00000452306 1352 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC009229.4-201ENST00000623854 1947 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 LINC00561-201ENST00000565815 2738 ntBASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.38□□□□□ -1.55
CCM2LQ9NUG4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AL445437.1-201ENST00000623157 3087 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 AC090017.1-201ENST00000548612 1779 ntBASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCM2LQ9NUG4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms