Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.6□□□□□ -1.51
USP47Q96K76 AL442128.2-201ENST00000620246 1824 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP47Q96K76 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP47Q96K76 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP47Q96K76 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.59□□□□□ -1.51
USP47Q96K76 AC018644.1-201ENST00000429934 551 ntBASIC5.59□□□□□ -1.51
USP47Q96K76 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.59□□□□□ -1.51
USP47Q96K76 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.59□□□□□ -1.51
USP47Q96K76 RPL7P24-201ENST00000493052 752 ntBASIC5.59□□□□□ -1.51
USP47Q96K76 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.59□□□□□ -1.51
USP47Q96K76 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.59□□□□□ -1.51
USP47Q96K76 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.59□□□□□ -1.51
USP47Q96K76 AC105036.1-201ENST00000566222 271 ntBASIC5.59□□□□□ -1.51
USP47Q96K76 AC120057.2-201ENST00000571520 271 ntBASIC5.59□□□□□ -1.51
USP47Q96K76 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.59□□□□□ -1.51
USP47Q96K76 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.59□□□□□ -1.51
USP47Q96K76 AC124312.6-202ENST00000623624 418 ntBASIC5.59□□□□□ -1.51
USP47Q96K76 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP47Q96K76 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
USP47Q96K76 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.58□□□□□ -1.52
USP47Q96K76 AL450992.3-201ENST00000413192 568 ntBASIC5.58□□□□□ -1.52
USP47Q96K76 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP47Q96K76 AC011742.1-201ENST00000431448 434 ntBASIC5.58□□□□□ -1.52
USP47Q96K76 AL445584.1-201ENST00000431451 330 ntBASIC5.58□□□□□ -1.52
USP47Q96K76 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.58□□□□□ -1.52
USP47Q96K76 RNA5SP179-201ENST00000517284 121 ntBASIC5.58□□□□□ -1.52
USP47Q96K76 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.58□□□□□ -1.52
USP47Q96K76 AC091167.4-201ENST00000605079 184 ntBASIC5.58□□□□□ -1.52
USP47Q96K76 AL592436.1-201ENST00000605135 558 ntBASIC5.58□□□□□ -1.52
USP47Q96K76 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.58□□□□□ -1.52
USP47Q96K76 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.58□□□□□ -1.52
USP47Q96K76 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.58□□□□□ -1.52
USP47Q96K76 AC138627.1-204ENST00000641894 765 ntBASIC5.58□□□□□ -1.52
USP47Q96K76 AC006484.1-201ENST00000435086 1884 ntBASIC5.58□□□□□ -1.52
USP47Q96K76 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP47Q96K76 AL627171.1-201ENST00000618845 1308 ntBASIC5.58□□□□□ -1.52
USP47Q96K76 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
USP47Q96K76 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.57□□□□□ -1.52
USP47Q96K76 SETP9-201ENST00000423837 832 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP47Q96K76 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.57□□□□□ -1.52
USP47Q96K76 RPL37P1-201ENST00000432310 284 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP47Q96K76 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.57□□□□□ -1.52
USP47Q96K76 AL133547.1-201ENST00000448546 220 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 HNRNPCP4-201ENST00000571636 900 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 SNX6P1-201ENST00000601728 1224 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP47Q96K76 AC106871.1-201ENST00000568324 3102 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP47Q96K76 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP47Q96K76 AC097504.1-201ENST00000515103 2415 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP47Q96K76 Z82217.1-201ENST00000625157 8149 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP47Q96K76 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.57□□□□□ -1.52
USP47Q96K76 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 AC083843.3-201ENST00000623679 2186 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 ZNF962P-201ENST00000443465 3140 ntBASIC5.57□□□□□ -1.52
USP47Q96K76 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP47Q96K76 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP47Q96K76 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP47Q96K76 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP47Q96K76 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.56□□□□□ -1.52
USP47Q96K76 ELOCP8-201ENST00000439309 332 ntBASIC5.56□□□□□ -1.52
USP47Q96K76 ELOCP15-201ENST00000442090 332 ntBASIC5.56□□□□□ -1.52
USP47Q96K76 RPS17P13-201ENST00000448974 407 ntBASIC5.56□□□□□ -1.52
USP47Q96K76 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP47Q96K76 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.56□□□□□ -1.52
USP47Q96K76 RNA5SP154-201ENST00000516193 111 ntBASIC5.56□□□□□ -1.52
USP47Q96K76 HMGN2P47-201ENST00000559378 272 ntBASIC5.56□□□□□ -1.52
USP47Q96K76 AC090312.1-201ENST00000580637 348 ntBASIC5.56□□□□□ -1.52
USP47Q96K76 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.56□□□□□ -1.52
USP47Q96K76 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.56□□□□□ -1.52
USP47Q96K76 LSM1P2-201ENST00000604911 322 ntBASIC5.56□□□□□ -1.52
USP47Q96K76 AC090912.3-201ENST00000609775 533 ntBASIC5.56□□□□□ -1.52
USP47Q96K76 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.56□□□□□ -1.52
USP47Q96K76 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP47Q96K76 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
USP47Q96K76 OR4G1P-202ENST00000641173 1788 ntBASIC5.56□□□□□ -1.52
USP47Q96K76 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP47Q96K76 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.56□□□□□ -1.52
USP47Q96K76 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
USP47Q96K76 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP47Q96K76 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP47Q96K76 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP47Q96K76 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
USP47Q96K76 RHOT1P2-201ENST00000366423 333 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.55□□□□□ -1.52
USP47Q96K76 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
USP47Q96K76 MIR200C-201ENST00000384980 68 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 SNORA3C-201ENST00000408792 125 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 RNA5SP306-201ENST00000411087 107 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 CYCSP10-201ENST00000417973 294 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 HIGD1AP4-201ENST00000430194 280 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.55□□□□□ -1.52
USP47Q96K76 RN7SL271P-201ENST00000487601 295 ntBASIC5.55□□□□□ -1.52
USP47Q96K76 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms