Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AP001880.2-201ENST00000538233 448 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 MTND3P12-201ENST00000559068 328 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC019322.1-201ENST00000571869 389 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC020910.3-201ENST00000603701 874 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 ELOCP35-201ENST00000604289 336 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC099676.1-201ENST00000608886 657 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AP005137.2-201ENST00000609238 400 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC018926.3-201ENST00000618841 406 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC087821.2-201ENST00000637086 450 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 ZNF663P-202ENST00000641770 1131 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC119744.1-201ENST00000454746 1715 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 ASNSP1-204ENST00000641977 1664 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AL450345.1-202ENST00000605741 3881 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 MTND4P13-201ENST00000402078 1023 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 MTCO2P31-201ENST00000402702 684 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 SNORA77-201ENST00000408716 125 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC023271.1-201ENST00000445936 1090 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AL354710.1-201ENST00000453641 246 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 MRPL35P4-201ENST00000453682 566 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 RN7SKP283-201ENST00000517197 270 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC023050.2-201ENST00000544968 387 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC069366.1-201ENST00000583159 838 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC092106.3-201ENST00000611308 722 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AL353726.1-201ENST00000614041 1000 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 Z99129.2-201ENST00000619967 314 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 CDRT1-208ENST00000630868 794 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 MFSD8-245ENST00000641743 948 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 MFSD8-216ENST00000641147 4009 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB4Q8WW32 AC025263.3-201ENST00000622965 1396 ntBASIC5.03□□□□□ -1.6
HMGB4Q8WW32 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB4Q8WW32 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB4Q8WW32 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
HMGB4Q8WW32 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB4Q8WW32 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB4Q8WW32 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
HMGB4Q8WW32 SNORA62-201ENST00000365493 153 ntBASIC5.02□□□□□ -1.61
HMGB4Q8WW32 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB4Q8WW32 MIR16-1-201ENST00000385271 89 ntBASIC5.02□□□□□ -1.61
HMGB4Q8WW32 MIR298-201ENST00000401212 88 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms