Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP35Q8NFH5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP35Q8NFH5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.12□□□□□ -1.91
NUP35Q8NFH5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP35Q8NFH5 LINC00561-201ENST00000565815 2738 ntBASIC3.12□□□□□ -1.91
NUP35Q8NFH5 AL139811.1-201ENST00000424779 2299 ntBASIC3.12□□□□□ -1.91
NUP35Q8NFH5 C4BPAP1-201ENST00000415474 1893 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 IPO8P1-201ENST00000455509 3109 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 MT-TP-201ENST00000387461 68 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 RPL23AP26-201ENST00000412728 464 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 GTF3AP1-201ENST00000416942 1004 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 BX510359.2-201ENST00000417920 305 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 BMS1P19-201ENST00000433925 393 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 PTMAP6-201ENST00000439110 327 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 CEACAMP7-201ENST00000444105 496 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 AL162151.2-201ENST00000448875 158 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 AC010307.1-201ENST00000467206 836 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 AC008953.1-201ENST00000497334 318 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 AC008802.1-201ENST00000519121 791 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 HMGN2P6-201ENST00000551091 273 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 MIR6862-1-201ENST00000613016 70 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 MIR6862-2-201ENST00000614755 70 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 MIR6886-201ENST00000619864 61 ntBASIC3.11□□□□□ -1.91
NUP35Q8NFH5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUP35Q8NFH5 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AC066616.2-201ENST00000559334 1481 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 RNU6-697P-201ENST00000363348 107 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 RNA5SP507-201ENST00000363603 121 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 Z98941.1-201ENST00000407764 100 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 RN7SKP229-201ENST00000410465 302 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 RN7SKP222-201ENST00000410651 315 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 PGBD4P8-201ENST00000412993 562 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 RPL30P3-201ENST00000424262 333 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 RBMY2QP-201ENST00000429799 1147 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 RPS26P40-201ENST00000435209 294 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AL500522.2-201ENST00000448562 343 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 TRY2P-201ENST00000448860 689 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 snoU13.20-201ENST00000459180 104 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 OR52A4P-201ENST00000472867 958 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 RN7SL481P-201ENST00000477764 299 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 RN7SL629P-201ENST00000489622 285 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AC093763.2-201ENST00000505334 1223 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AC008033.2-201ENST00000542626 177 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 AL589935.2-201ENST00000616471 1231 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 MIR6729-201ENST00000618194 65 ntBASIC3.1□□□□□ -1.91
NUP35Q8NFH5 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NUP35Q8NFH5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms