Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PRKDCP78527 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKDCP78527 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.77□□□□□ -1.97
PRKDCP78527 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC2.77□□□□□ -1.97
PRKDCP78527 OSTCP5-201ENST00000425293 453 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 RPL32P28-201ENST00000443577 397 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKDCP78527 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKDCP78527 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 AC007823.1-201ENST00000569932 1566 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC2.77□□□□□ -1.97
PRKDCP78527 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PRKDCP78527 ZNF602P-201ENST00000405929 924 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 AC096644.3-201ENST00000416788 338 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 RPL7P59-201ENST00000447700 943 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 CYCSP35-201ENST00000451978 304 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKDCP78527 AL049874.2-201ENST00000492636 288 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 OSBPL9P2-201ENST00000526582 1228 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.77□□□□□ -1.97
PRKDCP78527 NPM1P5-201ENST00000557228 838 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 NCAPGP2-201ENST00000557911 754 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.77□□□□□ -1.97
PRKDCP78527 AC022417.1-201ENST00000624768 1303 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
PRKDCP78527 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC2.77□□□□□ -1.97
PRKDCP78527 AL365440.1-201ENST00000436135 2167 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PRKDCP78527 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC2.77□□□□□ -1.97
PRKDCP78527 RPL7P60-201ENST00000397636 735 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.77□□□□□ -1.97
PRKDCP78527 Z97055.1-201ENST00000419730 712 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 BX890604.2-201ENST00000427883 474 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 RPS26P2-201ENST00000440331 348 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC2.77□□□□□ -1.97
PRKDCP78527 RANP8-201ENST00000444720 713 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.77□□□□□ -1.97
PRKDCP78527 RNU1-41P-201ENST00000516161 162 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 RNU1-48P-201ENST00000516400 162 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKDCP78527 AC006539.2-201ENST00000601729 572 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKDCP78527 AC005344.1-201ENST00000613391 459 ntBASIC2.77□□□□□ -1.97
PRKDCP78527 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRKDCP78527 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.77□□□□□ -1.97
PRKDCP78527 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 CCDC162P-202ENST00000368966 6751 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
PRKDCP78527 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 AL731532.2-201ENST00000623542 1953 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.76□□□□□ -1.97
PRKDCP78527 RNA5SP97-201ENST00000365006 84 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 RPL21P10-201ENST00000463521 490 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.76□□□□□ -1.97
PRKDCP78527 RNU7-143P-201ENST00000516781 65 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 AC079171.1-201ENST00000568788 914 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 IMMP1LP1-201ENST00000605170 488 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 AP005264.7-201ENST00000625003 745 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC2.76□□□□□ -1.97
PRKDCP78527 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
PRKDCP78527 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC2.76□□□□□ -1.97
PRKDCP78527 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 AL078604.1-201ENST00000404609 466 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 AC005019.1-201ENST00000436455 431 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 VN1R25P-201ENST00000443385 738 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 VN1R32P-201ENST00000452234 905 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.76□□□□□ -1.97
PRKDCP78527 AC090013.1-201ENST00000485147 480 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 PTGES3P3-201ENST00000511479 482 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 UBE2NP1-201ENST00000545592 458 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 AL121603.1-201ENST00000553815 142 ntBASIC2.76□□□□□ -1.97
PRKDCP78527 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC2.76□□□□□ -1.97
PRKDCP78527 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC2.76□□□□□ -1.97
PRKDCP78527 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.76□□□□□ -1.97
PRKDCP78527 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PRKDCP78527 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.76□□□□□ -1.97
PRKDCP78527 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PRKDCP78527 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKDCP78527 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms