Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PPM1AP1-201ENST00000502740 1135 ntBASIC4.07□□□□□ -1.76
VSX2P58304 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.07□□□□□ -1.76
VSX2P58304 AC147055.1-201ENST00000509261 750 ntBASIC4.07□□□□□ -1.76
VSX2P58304 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.07□□□□□ -1.76
VSX2P58304 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 AC100770.1-201ENST00000532310 322 ntBASIC4.07□□□□□ -1.76
VSX2P58304 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
VSX2P58304 AC006064.5-201ENST00000541782 248 ntBASIC4.07□□□□□ -1.76
VSX2P58304 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
VSX2P58304 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.07□□□□□ -1.76
VSX2P58304 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 AL109766.1-201ENST00000555080 552 ntBASIC4.07□□□□□ -1.76
VSX2P58304 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.07□□□□□ -1.76
VSX2P58304 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 AL139395.1-201ENST00000603662 160 ntBASIC4.07□□□□□ -1.76
VSX2P58304 AC012213.4-201ENST00000606457 354 ntBASIC4.07□□□□□ -1.76
VSX2P58304 FAM27D1-201ENST00000612308 341 ntBASIC4.07□□□□□ -1.76
VSX2P58304 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VSX2P58304 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.07□□□□□ -1.76
VSX2P58304 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.07□□□□□ -1.76
VSX2P58304 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
VSX2P58304 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VSX2P58304 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.07□□□□□ -1.76
VSX2P58304 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
VSX2P58304 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 LARP1BP1-201ENST00000506036 1359 ntBASIC4.06□□□□□ -1.76
VSX2P58304 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 NCSTNP1-201ENST00000406229 144 ntBASIC4.06□□□□□ -1.76
VSX2P58304 RPL23AP48-201ENST00000406913 488 ntBASIC4.06□□□□□ -1.76
VSX2P58304 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 AL161631.1-201ENST00000417933 486 ntBASIC4.06□□□□□ -1.76
VSX2P58304 UBTFL3-201ENST00000418934 1024 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AC073335.1-201ENST00000427776 363 ntBASIC4.06□□□□□ -1.76
VSX2P58304 DYNLL1P7-201ENST00000429273 258 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.06□□□□□ -1.76
VSX2P58304 AP000936.3-201ENST00000438127 255 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.06□□□□□ -1.76
VSX2P58304 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.06□□□□□ -1.76
VSX2P58304 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.06□□□□□ -1.76
VSX2P58304 RPL7AP52-201ENST00000458096 790 ntBASIC4.06□□□□□ -1.76
VSX2P58304 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.06□□□□□ -1.76
VSX2P58304 AC022336.1-201ENST00000475510 337 ntBASIC4.06□□□□□ -1.76
VSX2P58304 UBTFL6-201ENST00000477929 1024 ntBASIC4.06□□□□□ -1.76
VSX2P58304 RPS29P19-201ENST00000479709 171 ntBASIC4.06□□□□□ -1.76
VSX2P58304 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.06□□□□□ -1.76
VSX2P58304 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.06□□□□□ -1.76
VSX2P58304 AL592156.1-201ENST00000508758 304 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.06□□□□□ -1.76
VSX2P58304 VWA8P1-201ENST00000510889 176 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.06□□□□□ -1.76
VSX2P58304 RNA5SP73-201ENST00000516744 108 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AP003730.1-201ENST00000524605 285 ntBASIC4.06□□□□□ -1.76
VSX2P58304 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.06□□□□□ -1.76
VSX2P58304 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.06□□□□□ -1.76
VSX2P58304 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 AL161729.3-201ENST00000603533 673 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AC020910.2-201ENST00000603635 610 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AC092653.1-201ENST00000608509 531 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AC023043.4-201ENST00000612081 449 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AL356274.1-201ENST00000617064 410 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AC008013.2-202ENST00000637965 364 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
VSX2P58304 OR10AB1P-202ENST00000641219 1686 ntBASIC4.06□□□□□ -1.76
VSX2P58304 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VSX2P58304 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
VSX2P58304 AC009951.1-201ENST00000623674 2614 ntBASIC4.06□□□□□ -1.76
VSX2P58304 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.05□□□□□ -1.76
VSX2P58304 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VSX2P58304 AC012020.1-201ENST00000624541 1728 ntBASIC4.05□□□□□ -1.76
VSX2P58304 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX2P58304 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VSX2P58304 AL121657.1-201ENST00000327215 531 ntBASIC4.05□□□□□ -1.76
VSX2P58304 RN7SKP227-201ENST00000364445 330 ntBASIC4.05□□□□□ -1.76
VSX2P58304 MIR93-201ENST00000385024 80 ntBASIC4.05□□□□□ -1.76
VSX2P58304 AC104297.1-201ENST00000393779 870 ntBASIC4.05□□□□□ -1.76
VSX2P58304 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.05□□□□□ -1.76
VSX2P58304 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX2P58304 COX6B1P7-201ENST00000430845 235 ntBASIC4.05□□□□□ -1.76
VSX2P58304 MAPRE1P3-201ENST00000435438 796 ntBASIC4.05□□□□□ -1.76
VSX2P58304 ABCF2P2-201ENST00000450549 296 ntBASIC4.05□□□□□ -1.76
VSX2P58304 AC133473.1-201ENST00000455173 299 ntBASIC4.05□□□□□ -1.76
VSX2P58304 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.05□□□□□ -1.76
VSX2P58304 STRADBP1-201ENST00000478954 1281 ntBASIC4.05□□□□□ -1.76
VSX2P58304 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.05□□□□□ -1.76
VSX2P58304 PPBPP1-201ENST00000510807 373 ntBASIC4.05□□□□□ -1.76
VSX2P58304 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.05□□□□□ -1.76
VSX2P58304 AC090819.1-201ENST00000523800 1111 ntBASIC4.05□□□□□ -1.76
VSX2P58304 PHBP17-201ENST00000528576 541 ntBASIC4.05□□□□□ -1.76
VSX2P58304 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms