Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC124856.1-201ENST00000600819 896 ntBASIC4.06□□□□□ -1.76
LIM2P55344 AL049844.2-201ENST00000604280 628 ntBASIC4.06□□□□□ -1.76
LIM2P55344 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.06□□□□□ -1.76
LIM2P55344 AL445363.3-201ENST00000623080 671 ntBASIC4.06□□□□□ -1.76
LIM2P55344 AC011944.2-201ENST00000624440 683 ntBASIC4.06□□□□□ -1.76
LIM2P55344 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.06□□□□□ -1.76
LIM2P55344 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.06□□□□□ -1.76
LIM2P55344 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LIM2P55344 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LIM2P55344 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LIM2P55344 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LIM2P55344 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LIM2P55344 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LIM2P55344 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.06□□□□□ -1.76
LIM2P55344 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LIM2P55344 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LIM2P55344 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.05□□□□□ -1.76
LIM2P55344 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.05□□□□□ -1.76
LIM2P55344 AL359715.4-201ENST00000606629 1436 ntBASIC4.05□□□□□ -1.76
LIM2P55344 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.05□□□□□ -1.76
LIM2P55344 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LIM2P55344 BX005019.1-201ENST00000561881 1810 ntBASIC4.05□□□□□ -1.76
LIM2P55344 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LIM2P55344 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIM2P55344 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIM2P55344 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LIM2P55344 RNU1-132P-201ENST00000364300 164 ntBASIC4.05□□□□□ -1.76
LIM2P55344 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.05□□□□□ -1.76
LIM2P55344 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIM2P55344 RN7SKP222-201ENST00000410651 315 ntBASIC4.05□□□□□ -1.76
LIM2P55344 RPS23P10-201ENST00000416185 486 ntBASIC4.05□□□□□ -1.76
LIM2P55344 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LIM2P55344 P2RY10P2-201ENST00000416730 913 ntBASIC4.05□□□□□ -1.76
LIM2P55344 MFSD13B-201ENST00000420133 1290 ntBASIC4.05□□□□□ -1.76
LIM2P55344 RBMY1KP-201ENST00000423480 476 ntBASIC4.05□□□□□ -1.76
LIM2P55344 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.05□□□□□ -1.76
LIM2P55344 MTCO3P21-201ENST00000430791 643 ntBASIC4.05□□□□□ -1.76
LIM2P55344 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.05□□□□□ -1.76
LIM2P55344 AC073143.1-201ENST00000436316 395 ntBASIC4.05□□□□□ -1.76
LIM2P55344 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.05□□□□□ -1.76
LIM2P55344 RPL23AP81-201ENST00000455252 467 ntBASIC4.05□□□□□ -1.76
LIM2P55344 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.05□□□□□ -1.76
LIM2P55344 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.05□□□□□ -1.76
LIM2P55344 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
LIM2P55344 RPL35P6-201ENST00000490024 372 ntBASIC4.05□□□□□ -1.76
LIM2P55344 RN7SL691P-201ENST00000494487 301 ntBASIC4.05□□□□□ -1.76
LIM2P55344 AC104164.2-201ENST00000496953 495 ntBASIC4.05□□□□□ -1.76
LIM2P55344 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.05□□□□□ -1.76
LIM2P55344 CDH12P2-201ENST00000504393 298 ntBASIC4.05□□□□□ -1.76
LIM2P55344 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.05□□□□□ -1.76
LIM2P55344 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.05□□□□□ -1.76
LIM2P55344 AC006499.6-201ENST00000511169 607 ntBASIC4.05□□□□□ -1.76
LIM2P55344 RNU6-1004P-201ENST00000516584 111 ntBASIC4.05□□□□□ -1.76
LIM2P55344 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.05□□□□□ -1.76
LIM2P55344 IFITM8P-201ENST00000522529 394 ntBASIC4.05□□□□□ -1.76
LIM2P55344 PSMB7P1-201ENST00000556349 514 ntBASIC4.05□□□□□ -1.76
LIM2P55344 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.05□□□□□ -1.76
LIM2P55344 SS18L2P2-201ENST00000583960 235 ntBASIC4.05□□□□□ -1.76
LIM2P55344 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.05□□□□□ -1.76
LIM2P55344 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.05□□□□□ -1.76
LIM2P55344 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.05□□□□□ -1.76
LIM2P55344 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.05□□□□□ -1.76
LIM2P55344 AL355802.4-201ENST00000607635 548 ntBASIC4.05□□□□□ -1.76
LIM2P55344 AL162574.2-201ENST00000614618 657 ntBASIC4.05□□□□□ -1.76
LIM2P55344 AC114781.5-201ENST00000615297 108 ntBASIC4.05□□□□□ -1.76
LIM2P55344 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.05□□□□□ -1.76
LIM2P55344 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.05□□□□□ -1.76
LIM2P55344 AC008013.2-202ENST00000637965 364 ntBASIC4.05□□□□□ -1.76
LIM2P55344 AL592182.3-201ENST00000642132 3304 ntBASIC4.05□□□□□ -1.76
LIM2P55344 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIM2P55344 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LIM2P55344 AC024341.1-201ENST00000526444 1552 ntBASIC4.05□□□□□ -1.76
LIM2P55344 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.05□□□□□ -1.76
LIM2P55344 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
LIM2P55344 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LIM2P55344 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.05□□□□□ -1.76
LIM2P55344 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.05□□□□□ -1.76
LIM2P55344 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LIM2P55344 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.05□□□□□ -1.76
LIM2P55344 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIM2P55344 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LIM2P55344 AC009501.3-201ENST00000605001 1352 ntBASIC4.04□□□□□ -1.76
LIM2P55344 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LIM2P55344 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LIM2P55344 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LIM2P55344 ZNF90P1-201ENST00000480493 1951 ntBASIC4.04□□□□□ -1.76
LIM2P55344 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.04□□□□□ -1.76
LIM2P55344 RNU1-14P-201ENST00000362759 152 ntBASIC4.04□□□□□ -1.76
LIM2P55344 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LIM2P55344 RNU6-532P-201ENST00000384318 107 ntBASIC4.04□□□□□ -1.76
LIM2P55344 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LIM2P55344 RNA5SP36-201ENST00000410197 133 ntBASIC4.04□□□□□ -1.76
LIM2P55344 RN7SKP235-201ENST00000410662 305 ntBASIC4.04□□□□□ -1.76
LIM2P55344 AL160275.2-201ENST00000412010 394 ntBASIC4.04□□□□□ -1.76
LIM2P55344 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.04□□□□□ -1.76
LIM2P55344 RPL6P29-201ENST00000414863 865 ntBASIC4.04□□□□□ -1.76
LIM2P55344 AL161631.1-201ENST00000417933 486 ntBASIC4.04□□□□□ -1.76
LIM2P55344 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.04□□□□□ -1.76
LIM2P55344 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.04□□□□□ -1.76
LIM2P55344 AC016712.1-201ENST00000431088 378 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms