Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH6P55285 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH6P55285 AC018529.3-201ENST00000624212 2254 ntBASIC4.38□□□□□ -1.71
CDH6P55285 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH6P55285 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CDH6P55285 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CDH6P55285 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH6P55285 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH6P55285 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH6P55285 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH6P55285 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CDH6P55285 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH6P55285 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.37□□□□□ -1.71
CDH6P55285 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH6P55285 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CDH6P55285 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH6P55285 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH6P55285 ACTR3P2-201ENST00000439585 1257 ntBASIC4.37□□□□□ -1.71
CDH6P55285 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH6P55285 AC104629.2-201ENST00000468627 598 ntBASIC4.37□□□□□ -1.71
CDH6P55285 RN7SL303P-201ENST00000469773 251 ntBASIC4.37□□□□□ -1.71
CDH6P55285 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH6P55285 RN7SL585P-201ENST00000470538 280 ntBASIC4.37□□□□□ -1.71
CDH6P55285 METTL15P1-201ENST00000481421 1045 ntBASIC4.37□□□□□ -1.71
CDH6P55285 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH6P55285 AC008958.1-201ENST00000511047 682 ntBASIC4.37□□□□□ -1.71
CDH6P55285 RAB9BP1-201ENST00000519581 626 ntBASIC4.37□□□□□ -1.71
CDH6P55285 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH6P55285 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.37□□□□□ -1.71
CDH6P55285 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH6P55285 AC063950.1-201ENST00000552036 308 ntBASIC4.37□□□□□ -1.71
CDH6P55285 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.37□□□□□ -1.71
CDH6P55285 AC018552.3-201ENST00000567416 561 ntBASIC4.37□□□□□ -1.71
CDH6P55285 MIR4284-201ENST00000578924 81 ntBASIC4.37□□□□□ -1.71
CDH6P55285 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH6P55285 FAM27D1-201ENST00000612308 341 ntBASIC4.37□□□□□ -1.71
CDH6P55285 SNX18P1Y-201ENST00000616231 511 ntBASIC4.37□□□□□ -1.71
CDH6P55285 AC009237.17-201ENST00000618111 748 ntBASIC4.37□□□□□ -1.71
CDH6P55285 AL121890.3-201ENST00000618494 516 ntBASIC4.37□□□□□ -1.71
CDH6P55285 MIR7702-201ENST00000621931 59 ntBASIC4.37□□□□□ -1.71
CDH6P55285 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.37□□□□□ -1.71
CDH6P55285 MIR6715B-201ENST00000637172 77 ntBASIC4.37□□□□□ -1.71
CDH6P55285 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH6P55285 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH6P55285 AC012020.1-201ENST00000624541 1728 ntBASIC4.37□□□□□ -1.71
CDH6P55285 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CDH6P55285 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH6P55285 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH6P55285 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH6P55285 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH6P55285 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH6P55285 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
CDH6P55285 RNA5SP388-201ENST00000362584 119 ntBASIC4.36□□□□□ -1.71
CDH6P55285 RNU6-891P-201ENST00000384280 111 ntBASIC4.36□□□□□ -1.71
CDH6P55285 ST13P16-201ENST00000401760 781 ntBASIC4.36□□□□□ -1.71
CDH6P55285 AL603766.1-201ENST00000407763 664 ntBASIC4.36□□□□□ -1.71
CDH6P55285 RNU6-603P-201ENST00000411403 107 ntBASIC4.36□□□□□ -1.71
CDH6P55285 AL592293.2-201ENST00000422292 996 ntBASIC4.36□□□□□ -1.71
CDH6P55285 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH6P55285 MTCO3P21-201ENST00000430791 643 ntBASIC4.36□□□□□ -1.71
CDH6P55285 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH6P55285 AC092013.1-201ENST00000438795 332 ntBASIC4.36□□□□□ -1.71
CDH6P55285 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH6P55285 AC009963.2-201ENST00000453431 138 ntBASIC4.36□□□□□ -1.71
CDH6P55285 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH6P55285 EIF2S2P5-201ENST00000457635 968 ntBASIC4.36□□□□□ -1.71
CDH6P55285 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH6P55285 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH6P55285 AC017037.1-201ENST00000508460 471 ntBASIC4.36□□□□□ -1.71
CDH6P55285 KCTD9P2-201ENST00000512203 1013 ntBASIC4.36□□□□□ -1.71
CDH6P55285 AC108471.1-201ENST00000513977 287 ntBASIC4.36□□□□□ -1.71
CDH6P55285 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH6P55285 AC034205.1-201ENST00000520621 638 ntBASIC4.36□□□□□ -1.71
CDH6P55285 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.36□□□□□ -1.71
CDH6P55285 OR5M7P-201ENST00000526140 972 ntBASIC4.36□□□□□ -1.71
CDH6P55285 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH6P55285 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH6P55285 TVP23BP1-201ENST00000557500 617 ntBASIC4.36□□□□□ -1.71
CDH6P55285 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH6P55285 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH6P55285 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH6P55285 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH6P55285 AC010200.2-201ENST00000605098 235 ntBASIC4.36□□□□□ -1.71
CDH6P55285 AC017076.1-201ENST00000607613 578 ntBASIC4.36□□□□□ -1.71
CDH6P55285 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH6P55285 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH6P55285 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH6P55285 AC067852.7-201ENST00000623270 535 ntBASIC4.36□□□□□ -1.71
CDH6P55285 AC020763.5-201ENST00000623298 430 ntBASIC4.36□□□□□ -1.71
CDH6P55285 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CDH6P55285 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH6P55285 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH6P55285 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH6P55285 AC009229.4-201ENST00000623854 1947 ntBASIC4.36□□□□□ -1.71
CDH6P55285 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH6P55285 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH6P55285 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDH6P55285 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH6P55285 RNU1-132P-201ENST00000364300 164 ntBASIC4.35□□□□□ -1.71
CDH6P55285 RNU6-670P-201ENST00000364312 104 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms