Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS2P54868 AC069157.1-201ENST00000421749 137 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS2P54868 ABCF2P2-201ENST00000450549 296 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGCS2P54868 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGCS2P54868 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.76□□□□□ -1.65
HMGCS2P54868 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGCS2P54868 AC108145.1-201ENST00000503770 153 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 BNIP3P41-201ENST00000503774 571 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 KRT19P6-201ENST00000510983 209 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.76□□□□□ -1.65
HMGCS2P54868 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGCS2P54868 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGCS2P54868 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS2P54868 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGCS2P54868 SNORD39.2-201ENST00000579995 76 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 AC110743.1-201ENST00000584870 478 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS2P54868 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGCS2P54868 AL606537.1-201ENST00000607258 2011 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 AL122125.1-201ENST00000616999 600 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGCS2P54868 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS2P54868 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS2P54868 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS2P54868 THAP12P8-201ENST00000447914 2115 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HMGCS2P54868 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS2P54868 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS2P54868 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS2P54868 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HMGCS2P54868 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS2P54868 RNA5SP387-201ENST00000364226 106 ntBASIC4.75□□□□□ -1.65
HMGCS2P54868 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.75□□□□□ -1.65
HMGCS2P54868 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS2P54868 RBMY1KP-201ENST00000423480 476 ntBASIC4.75□□□□□ -1.65
HMGCS2P54868 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.75□□□□□ -1.65
HMGCS2P54868 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGCS2P54868 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGCS2P54868 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS2P54868 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGCS2P54868 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS2P54868 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGCS2P54868 AC090151.1-201ENST00000520784 730 ntBASIC4.75□□□□□ -1.65
HMGCS2P54868 AC122134.1-201ENST00000565664 1104 ntBASIC4.75□□□□□ -1.65
HMGCS2P54868 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS2P54868 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.75□□□□□ -1.65
HMGCS2P54868 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS2P54868 AC244100.1-202ENST00000621554 382 ntBASIC4.75□□□□□ -1.65
HMGCS2P54868 AC139713.2-215ENST00000641428 5037 ntBASIC4.75□□□□□ -1.65
HMGCS2P54868 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS2P54868 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS2P54868 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS2P54868 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS2P54868 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HMGCS2P54868 AC093849.1-201ENST00000563631 2209 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS2P54868 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS2P54868 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS2P54868 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HMGCS2P54868 THAP12P5-201ENST00000405864 2275 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.74□□□□□ -1.65
HMGCS2P54868 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGCS2P54868 AC083799.1-201ENST00000366451 910 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 OR13C3-201ENST00000374781 1108 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HMGCS2P54868 RNA5SP372-201ENST00000390836 115 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 DHFRP5-201ENST00000406944 564 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 RAB9AP3-201ENST00000412737 573 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 NOTCH2P1-201ENST00000443481 624 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.74□□□□□ -1.65
HMGCS2P54868 RAB9AP1-201ENST00000449393 573 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 RPS11P1-201ENST00000451072 473 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 OR9M1P-201ENST00000459641 921 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 AL139099.1-201ENST00000497398 403 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS2P54868 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS2P54868 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.74□□□□□ -1.65
HMGCS2P54868 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS2P54868 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS2P54868 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS2P54868 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.74□□□□□ -1.65
HMGCS2P54868 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS2P54868 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGCS2P54868 AC008739.3-201ENST00000603262 127 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HMGCS2P54868 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HMGCS2P54868 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
HMGCS2P54868 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.74□□□□□ -1.65
HMGCS2P54868 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGCS2P54868 Z82217.1-201ENST00000625157 8149 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS2P54868 EOGT-210ENST00000615922 1931 ntBASIC4.74□□□□□ -1.65
HMGCS2P54868 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.73□□□□□ -1.65
HMGCS2P54868 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMGCS2P54868 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMGCS2P54868 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMGCS2P54868 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms